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Protein Overview: ASSY_ARATH

General Information:
Name(s) found: ASSY_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Argininosuccinate synthase, chloroplastic OS=Arabidopsis thaliana GN=At4g24830 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: arginine biosynthetic process [IEA][ISS]
    Molecular Function: ATP binding [IEA][ISS]
    argininosuccinate synthase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEISATSFP SSSSSALVIR SSHNGSLKCQ NVAVPKTTSQ FQELSLKRSQ LVGNAVVTGH  60
   61 VTGSRSCKNQ AIRAVLSGDG TALTTDSKEA GLRGKLKKVV LAYSGGLDTS VIVPWLKENY 120
  121 GCEVVCFTAD VGQGIKELEG LEQKAKASGA SQLVVKDLTE EFVKDFIFPC LRAGAIYERK 180
  181 YLLGTSMARP VIAKAMVDVA AEVGADAVAH GCTGKGNDQV RFELTFFSLN PELKVVAPWR 240
  241 EWEIQGREDA IEYAKKHNVP VPVTKKSIYS RDRNLWHLSH EGDLLEDPAN EPKKDMYMMS 300
  301 VDPEDAPDQP EYIEIGIESG LPVALNGKAL SPATLLAELN TIGGKHGIGR IDMVENRLVG 360
  361 MKSRGVYETP GGTILFAAVQ ELESLTLDRE SIQVKDTLAL KYAEMVYAGR WFDPLRESMD 420
  421 AFMEKITETT TGSVTLKLYK GSVSVTGRQS PNSLYRQDIS SFEGSEIYNQ ADAAGFIRLY 480
  481 GLPMKIRAML KKIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 59.30103 GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain
    2 View Details [97..494] PSI-BLAST 127.0 Argininosuccinate synthetase, N-terminal domain; Argininosuccinate synthetase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • argininosuccinate synthase activity
    		•  5.55984418125277 bayes_pls_golite062009
  • ligase activity
    		•  2.54636182867584 bayes_pls_golite062009
  • catalytic activity
    		•  1.4716728594386 bayes_pls_golite062009
  • binding
    		•  0.949267645607863 bayes_pls_golite062009
  • protein binding
    		•  0.476576076629648 bayes_pls_golite062009
  • asparagine synthase (glutamine-hydrolyzing) activity
    		•  0.3673193848392 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.204705463374024 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle