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Protein Overview: gi|19347844, gi|...

General Information:
Name(s) found: gi|30698820 [NCBI NR]
gi|25054983 [NCBI NR]
gi|19347844 [NCBI NR]
Description(s) found:
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  • gi|30698820|ref|NP_177329.2| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|25054983|gb|AAN71963.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19347844|gb|AAL86002.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|25054983|gb|AAN71963.1| unknown protein [Arabidopsis thaliana]gi|30698820|ref|NP_177329.2| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transducin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | transducin family protein / WD-40 repeat family protein | chr1:27026086-27028042 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | transducin family protein / WD-40 repeat family protein | chr1:27022424-27024380 FORWARD LENGTH=407 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g71840 OS=Arabidopsis thaliana GN=At1g71840 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNTNNTEM NNLAMEEEDE GEIFLGESDV LREIDVDEED LPEADDDDMD DDGEQFDEND  60
   61 DSVHTFTGHK GELYALACSP TDATLVATGG GDDKAFLWKI GNGDWAAELP GHKDSVSCLA 120
  121 FSYDGQLLAS GGLDGVVQIF DASSGTLKCV LDGPGAGIEW VRWHPRGHIV LAGSEDCSLW 180
  181 MWNADKEAYL NMFSGHNLNV TCGDFTPDGK LICTGSDDAS LIVWNPKTCE SIHIVKGHPY 240
  241 HTEGLTCLDI NSNSSLAISG SKDGSVHIVN IVTGKVVSSL NSHTDSVECV KFSPSSATIP 300
  301 LAATGGMDKK LIIWDLQHST PRFICEHEEG VTSLTWIGTS KYLATGCANG TVSIWDSLLG 360
  361 NCVHTYHGHQ DAVQAISVST NTDFIVSVSV DNTARVFESS EFQNKVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..358] PSI-BLAST 74.0 No description for 2ovpB was found.
    2 View Details [359..407] FFAS03 2.79 Tup1, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle