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View Structure Prediction Details

Protein: gi|19347844, gi|...
Organism: Arabidopsis thaliana
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19347844, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
513.0 [0..2] [407..1190]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNTNNTEM NNLAMEEEDE GEIFLGESDV LREIDVDEED LPEADDDDMD DDGEQFDEND  60
   61 DSVHTFTGHK GELYALACSP TDATLVATGG GDDKAFLWKI GNGDWAAELP GHKDSVSCLA 120
  121 FSYDGQLLAS GGLDGVVQIF DASSGTLKCV LDGPGAGIEW VRWHPRGHIV LAGSEDCSLW 180
  181 MWNADKEAYL NMFSGHNLNV TCGDFTPDGK LICTGSDDAS LIVWNPKTCE SIHIVKGHPY 240
  241 HTEGLTCLDI NSNSSLAISG SKDGSVHIVN IVTGKVVSSL NSHTDSVECV KFSPSSATIP 300
  301 LAATGGMDKK LIIWDLQHST PRFICEHEEG VTSLTWIGTS KYLATGCANG TVSIWDSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.0
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [359-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGNCVHTYHG HQDAVQAISV STNTDFIVSV SVDNTARVFE SSEFQNKVT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.79
Match: 1erjA
Description: Tup1, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle