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Protein Overview: SHL_ARATH

General Information:
Name(s) found: SHL_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Chromatin remodeling protein SHL OS=Arabidopsis thaliana GN=SHL PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: post-embryonic development [IMP]
    Molecular Function: transcription factor activity [ISS]
    zinc-mediated transcriptional activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKQKAPRKQ LKSYKLKHIN KSIQEGDAVL MRSSEPGKPS YVARVEAIET DARGSHAKVR  60
   61 VRWYYRPEES IGGRRQFHGA KEVFLSDHFD FQSADTIEGK CKVHSFSSYT KLDSVGNDDF 120
  121 FCRFEYNSTT GAFDPDRVTV FCKCEMPYNP DDLMVQCEEC SEWFHPSCIG TTIEEAKKPD 180
  181 NFYCEECSPQ QQNLHNSNST SNNRDAKVNG KRSLEVTKSK NKHTKRPG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 19.0 Crystal structure of the proximal BAH domain of polybromo
    2 View Details [134..228] PSI-BLAST 11.39794 No description for 2f6jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle