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Protein Overview: gi|30696124, gi|...

General Information:
Name(s) found: gi|30696124 [NCBI NR]
gi|17529226 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30696124|ref|NP_564718.2| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17529226|gb|AAL38840.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1055 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: metabolic process [IEA]
    cell redox homeostasis [IEA]
    Molecular Function: catalytic activity [IEA]
    oxidoreductase activity [IEA]
    hydrolase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKLTSPPS VFSQSRRLSS SSLIPIRSKS TFTGFRSRTG VYLSKTTALQ SSTKLSVAAE  60
   61 SPAATIATDD WGKVSAVLFD MDGVLCNSED LSRRAAVDVF TEMGVEVTVD DFVPFMGTGE 120
  121 AKFLGGVASV KEVKGFDPDA AKERFFEIYL DKYAKPESGI GFPGALELVT ECKNKGLKVA 180
  181 VASSADRIKV DANLKAAGLS LTMFDAIVSA DAFENLKPAP DIFLAAAKIL GVPTSECVVI 240
  241 EDALAGVQAA QAANMRCIAV KTTLSEAILK DAGPSMIRDD IGNISINDIL TGGSDSTRNS 300
  301 TAMLEENTVS DKTSANGFQG SRRDILRYGS LGIALSCVYF AATNWKAMQY ASPKALWNAL 360
  361 VGAKSPSFTQ NQGEGRVQQF VDYIADLESK QTATTVPEFP SKLDWLNTAP LQFRRDLKGK 420
  421 VVILDFWTYC CINCMHVLPD LEFLEKKYKD MPFTVVGVHS AKFDNEKDLD AIRNAVLRYD 480
  481 ISHPVVNDGD MYMWRELGIN SWPTFAVVSP NGKVIAQIAG EGHRKDLDDV VAAALTYYGG 540
  541 KNVLDSTPLP TRLEKDNDPR LATSPLKFPG KLAIDTLNNR LFISDSNHNR IIVTDLEGNF 600
  601 IVQIGSSGEE GFQDGSFEDA AFNRPQGLAY NAKKNLLYVA DTENHALREI DFVNERVQTL 660
  661 AGNGTKGSDY QGGRKGTKQL LNSPWDVCFE PVNEKVYIAM AGQHQIWEYS VLDGITRVFS 720
  721 GNGYERNLNG STPQTTSFAQ PSGISLGPDL KEAYIADSES SSIRALDLQT GGSRLLAGGD 780
  781 PYFSENLFKF GDNDGVGAEV LLQHPLGVLC ANDGQIYLTD SYNHKIKKLD PVTKRVVTLA 840
  841 GTGKAGFKDG KVKGAQLSEP AGLAITENGR LFVADTNNSL IRYIDLNKGE DSEILTLELK 900
  901 GVQPPTPKAK SLKRLRKRAS ADTKIVKVDS VTSREGDLNL KISLPDGYHF SKEARSKFVV 960
  961 DVEPENAVAI DPTEGTLSPE GSTMLHFIQS STSASVGKIS CKVYYCKEDE VCLYQSVQFE1020
 1021 VPFKVESELS ASPTITFTVT PRAPDAGGLQ LQGTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] PSI-BLAST 39.522879 No description for 2nyvA was found.
    2 View Details [231..916] PSI-BLAST 39.39794 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
    3 View Details [917..1055] PSI-BLAST 25.69897 No description for 3dm0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle