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Protein Overview: gi|15293291, gi|...

General Information:
Name(s) found: gi|18404228 [NCBI NR]
gi|15293291 [NCBI NR]
gi|13507553 [NCBI NR]
Description(s) found:
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  • gi|18404228|ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15293291|gb|AAK93756.1| putative rubisco expression protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13507553|gb|AAK28639.1|AF360342_1 putative rubisco expression protein [Arabidopsis thaliana] [NCBI NR]
  • putative rubisco expression protein [Arabidopsis thaliana]gi|13507553|gb|AAK28639.1| putative rubisco expression protein [Arabidopsis thaliana]gi|18404228|ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat family protein [Arabidopsis thali [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 AAA-type ATPase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | AAA-type ATPase family protein / ankyrin repeat family protein | chr3:8945685-8947793 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative rubisco expression protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | AAA-type ATPase family protein / ankyrin repeat family protein | chr3:8945678-8947786 REVERSE LENGTH=481 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AAA-type ATPase family protein / ankyrin repeat family protein OS=Arabidopsis thaliana GN=At3g24530 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: protein metabolic process [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATPase activity [ISS]
    ATP binding [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRQNGGGQR LRSARPTTIH DCALSGDLIA LQRLLKDNPS LLNERNPVMY HTPLHVSAGN  60
   61 GNVDIVKYLL AWTGSDKVEL EAMNTYGETP LHMAAKNGCN EAAKLLLESG AFIEAKASNG 120
  121 MTPLHLAVWY SITAKEISTV KTLLDHNADC SAKDNEGMTP LDHLPQGQGS EKLRELLRWF 180
  181 LQEQRKRSAL EQCGKTKAKM ELLEDELSNI VGLSELKTQL RKWAKGMLLD ERRRALGLNI 240
  241 GTRRPPHMAF LGNPGTGKTM VARVLGKLLN TVGILPTDKV TEVQRTDLVG EFVGHTGPKT 300
  301 RRKIQEAEGG ILFVDEAYRL IPMQKADDKD YGLEALEEIM SVMDTGKIVV IFAGYSEPMK 360
  361 RVIASNEGFC RRVTKFFNFS DFSAKELAQI LHIKMNNQGE DTLFYGFRLH ESCTLQEIAS 420
  421 LIEAETTEKQ RKEMNGGLVD TLLVNARENL DLRLSFECVD TEEICTIKLE DLEAGLRVFS 480
  481 Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 28.0 Ankyrin-R
    2 View Details [345..403] PSI-BLAST 23.522879 ClpB
    3 View Details [404..481] PSI-BLAST 44.69897 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle