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Protein Overview: gi|13430614, gi|...

General Information:
Name(s) found: gi|18417885 [NCBI NR]
gi|15293171 [NCBI NR]
gi|13430614 [NCBI NR]
Description(s) found:
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  • gi|18417885|ref|NP_568327.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15293171|gb|AAK93696.1| putative lipase [Arabidopsis thaliana] [NCBI NR]
  • gi|13430614|gb|AAK25929.1|AF360219_1 putative lipase [Arabidopsis thaliana] [NCBI NR]
  • putative lipase [Arabidopsis thaliana]gi|13430614|gb|AAK25929.1| putative lipase [Arabidopsis thaliana]gi|18417885|ref|NP_568327.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hydrolase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | hydrolase, alpha/beta fold family protein | chr5:5266051-5267778 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • catalytic/ hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative lipase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:5266048-5267775 FORWARD LENGTH=351 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Hydrolase, alpha/beta fold family protein OS=Arabidopsis thaliana GN=At5g16120 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of B3H7N1, Hydrolase, alpha/beta fold family protein OS=Arabidopsis thaliana GN=At5g16120 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTATLDNN EELRRLREVN IDEAPGRRRV RDSLKDIQLN LDHILFKTPE NGIKTKESFE  60
   61 VNSRGVEIFS KSWLPEASKP RALVCFCHGY GDTCTFFFEG IARRLALSGY GVFAMDYPGF 120
  121 GLSEGLHGYI PSFDLLVQDV IEHYSNIKAN PEFSSLPSFL FGQSMGGAVS LKIHLKQPNA 180
  181 WAGAVLLAPM CKIADDLVPP PVLKQILIGL ANVLPKHKLV PQKDLAEAGF RDIRKRDMTP 240
  241 YNMICYSGKP RLRTAVEMLR TTQDIEKQLQ EVSLPILILH GEADTVTDPS VSRELYEKAK 300
  301 SPDKKIVLYE NAYHSLLEGE PDDMILRVLS DIISWLNDHS LQAEGSSVTT M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 35.221849 Human soluble Epoxide Hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity
    		•  1.02824339321154 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.282381128231187 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  0.054530214464529 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.00303228391703936 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle