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Protein Overview: COPDA_ARATH

General Information:
Name(s) found: COPDA_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Probable cytosolic oligopeptidase A OS=Arabidopsis thaliana GN=CYOP PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    apoplast [IDA]
    cytosol [IDA]
    Biological Process: proteolysis [ISS]
    response to cadmium ion [IEP]
    Molecular Function: metalloendopeptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEDTLSSN PLLQNFDFPP FDSVDAHHVR PGIRALLQQL EAELEQLEKA VEPSWPKLVE  60
   61 PLEKIIDRLS VVWGMINHLK AVKDTPELRA AIEEVQPEKV KFQLRLGQSK PIYNAFKAIR 120
  121 ESPDWNSLSE ARQRLVEAQI KEAVLSGIAL EDDKREEFNK IEQELEKLSH KFSENVLDAT 180
  181 KKFEKLITDK KEIEGLPPSA LGLFAQAAVS KGHETATADT GPWLITLDAP SYLPVMQHAK 240
  241 NRALREEVYR AYLSRASSGD LDNTAIIDQI LKLRLEKAKL LGYRNYAEVS MATKMATVEK 300
  301 ADELLEKLRS ASWDPAVQDI EDLKSFAKNQ GAAEADSLTH WDITFWSERL RESKYDINEE 360
  361 ELRPYFSLPK VMDALFGLAK TLFGIDVVPA DGVAPVWNSD VRFYCVKDSS GNPTAYFYFD 420
  421 PYSRPSEKRD GAWMDEVFSR SRVMAQKGSS VRLPVAQMVC NQTPPVGDKP SLMTFREVET 480
  481 VFHEFGHALQ HMLTKEDEGL VAGIRNIEWD AVELPSQFME NWCYHRDTLM SIAKHYQTGE 540
  541 TLPENVYKKL LAARTFRAGS LSLRQLKFAT VDLELHTKYM PGGAETIYEV DQRVSIKTQV 600
  601 IPPLPEDRFL CSFSHIFAGG YAAGYYSYKW AEVLSADAFS AFEDAGLDDI KAVKETGQRF 660
  661 RNTILALGGG KAPLKVFVEF RGREPSPEPL LRHNGLLAAS A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..701] PSI-BLAST 148.0 No description for 2o36A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle