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Protein Overview: DJ1A_ARATH

General Information:
Name(s) found: DJ1A_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein DJ-1 homolog A OS=Arabidopsis thaliana GN=DJ1A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: response to cadmium ion [IEP]
    thiamin biosynthetic process [ISS]
    Molecular Function: catalytic activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFTKTVLI PIAHGTEPLE AVAMITVLRR GGADVTVASV ETQVGVDACH GIKMVADTLL  60
   61 SDITDSVFDL IVLPGGLPGG ETLKNCKSLE NMVKKQDSDG RLNAAICCAP ALALGTWGLL 120
  121 EGKKATGYPV FMEKLAATCA TAVESRVQID GRIVTSRGPG TTIEFSITLI EQLFGKEKAD 180
  181 EVSSILLLRP NPGEEFTFTE LNQTNWSFED TPQILVPIAE ESEEIEAIAL VDILRRAKAN 240
  241 VVIAAVGNSL EVEGSRKAKL VAEVLLDEVA EKSFDLIVLP GGLNGAQRFA SCEKLVNMLR 300
  301 KQAEANKPYG GICASPAYVF EPNGLLKGKK ATTHPVVSDK LSDKSHIEHR VVVDGNVITS 360
  361 RAPGTAMEFS LAIVEKFYGR EKALQLGKAT LV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 37.522879 Crystal Structure of Human DJ-1
    2 View Details [195..392] FFAS03 7.03 Crystal Structure of E. coli protein YajL (ThiJ)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • binding
    		•  1.22860407524238 bayes_pls_golite062009
  • ligase activity
    		•  0.606811845310629 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.34963817887651 bayes_pls_golite062009
  • omega peptidase activity
    		•  0.11699697380316 bayes_pls_golite062009
  • protein binding
    		•  0.0152024556625711 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.30647482404955 bayes_pls_golite062009
  • catalytic activity
    		•  1.21522719658673 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.359234647411816 bayes_pls_golite062009
  • ligase activity
    		•  0.337056813852457 bayes_pls_golite062009
  • protein binding
    		•  0.0617986378858703 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle