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Protein Overview: gi|26452553, gi|...

General Information:
Name(s) found: gi|30688700 [NCBI NR]
gi|28973185 [NCBI NR]
gi|26452553 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30688700|ref|NP_181686.2| transcription termination factor [Arabidopsis thaliana] [NCBI NR]
  • gi|28973185|gb|AAO63917.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26452553|dbj|BAC43361.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: transcription termination [IEA]
    Molecular Function: transcription termination factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDDDLWGP PRVFVVVQDD TFRKQTVRRC EFWFDFRTDV LEENFQNEKY CELVWRILTE  60
   61 KKRQVTEIAE LERVSVSVSA QNDTASSGSG GDLHEIDSSD SDKTLSTTLP DSDTSSAKLA 120
  121 LDDDENTSSI SDAQTAQTVQ IRDSSNDDTE DIEPETRLMP HETAANDPLT VEVAEDADTS 180
  181 SSPVLESKID EAEEHSCSSL VTDQVFDPIK QALENKSSSA ISRESIGGST LRPLHLETRE 240
  241 KANTTDEDGD ILKDHQQNDS LQDIVTVSEP FTTESLLEMC DEPDKGRDIP CGERSKKSHP 300
  301 EAVVKTVVKD ELIISLLTEA RKKAESKNPG SVLIKKRQRQ SNSSDNKGAN TSFIRNIKQK 360
  361 VQGGAGEINI DPVKNSTQST PKIIRGSSVP TQHADSLLDS SMDGKIQRGG KNVSGSLISL 420
  421 SISELKKKTG KELRSIAKDL KVQHYYKLKK EDLLQRITNQ LNPQLADCTK QRMES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [125..290] deduced N/A No confident structure predictions are available.
    3 View Details [291..379] deduced N/A No confident structure predictions are available.
    4 View Details [380..475] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle