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Protein Overview: DDPS4_ARATH

General Information:
Name(s) found: DDPS4_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Dehydrodolichyl diphosphate synthase 4 OS=Arabidopsis thaliana GN=At5g58782 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 289 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: dolichol biosynthetic process [IGI]
    Molecular Function: dehydrodolichyl diphosphate synthase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSMLWFLLS LLSLLLLPCL RPCFPAKGSL KNKKKIDKGT YVVGEEETPK ELQRELMPRH  60
   61 VAVIMDGNRR WAKQTGLLTS QGYEAGAKRL LEFADLCFKL GINTVSAFAF STENWGRHKI 120
  121 EVKCLMYLFQ RYLKSKIQFF QSKEIRVSVI GNLAKIPESL LRTVHELEEA TKSYKKKHLI 180
  181 LAIDYSGRFD ILGACKNIVK KSEQGLIREE DVDETLFERE LQTRCTEFPS PDLLIRTSGE 240
  241 QRISNFFLWQ LAYTEFFFSP VLWPDFDKQK FIEALVSYQR RDRRFGSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] PSI-BLAST 89.154902 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.331797220769091 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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