YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DDPS4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSMLWFLLS LLSLLLLPCL RPCFPAKGSL KNKKKIDKGT YVVGEEETPK ELQRELMPRH  60
   61 VAVIMDGNRR WAKQTGLLTS QGYEAGAKRL LEFADLCFKL GINTVSAFAF STENWGRHKI 120
  121 EVKCLMYLFQ RYLKSKIQFF QSKEIRVSVI GNLAKIPESL LRTVHELEEA TKSYKKKHLI 180
  181 LAIDYSGRFD ILGACKNIVK KSEQGLIREE DVDETLFERE LQTRCTEFPS PDLLIRTSGE 240
  241 QRISNFFLWQ LAYTEFFFSP VLWPDFDKQK FIEALVSYQR RDRRFGSRL

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	289	0.99