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Protein Overview: PS13B_ARATH

General Information:
Name(s) found: PS13B_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana GN=RPN9B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    proteasome regulatory particle, lid subcomplex [ISS]
    Biological Process: protein catabolic process [TAS]
    ubiquitin-dependent protein catabolic process [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALQYLESQ KNAHPELGEW YNSLADLYQK KLWHQLTLKL EQFIALSVFQ AGDALIQLYN  60
   61 NFITDFETRI NLLKLAHFAV VVSRQYPEKE AAVSYLEGVI EKLKATKESR INEPISYIET 120
  121 QIALFKLEQG DQKECKKILD DGKSLLDSMT DIDPSVYANF FWVSSQYHKV RQEFSEFYKN 180
  181 ALLYLAYTSV DSLSESFKLD LAFDLSLSAL LGENIYNFGE LLAHPILKSL LGTNVEWLYH 240
  241 ILQAFNHGDL VQYQELCRVH NASLSAQPAL VENEKKLLEK INILCLIEII FSRPAEDRTI 300
  301 PLSVIAERTK LSIEDVEHLL MKSLSVHLIE GILDQVNGTV YVSWAQPRVL GIPQIKSLRD 360
  361 QLDSWVDKVH TTLLSVEAET PDLVAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 5.391988 View MSA. No confident structure predictions are available.
    2 View Details [189..292] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [293..386] PSI-BLAST 9.522879 Solution structure of the PCI domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle