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Protein Overview: gi|30696806, gi|...

General Information:
Name(s) found: gi|62320781 [NCBI NR]
gi|30696806 [NCBI NR]
gi|26449788 [NCBI NR]
Description(s) found:
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  • gi|62320781|dbj|BAD95442.1| caffeic O-methyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|30696806|ref|NP_176502.2| O-methyltransferase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|26449788|dbj|BAC42017.1| putative caffeic O-methyltransferase [Arabidopsis thaliana] [NCBI NR]
  • putative caffeic O-methyltransferase [Arabidopsis thaliana]gi|30696806|ref|NP_176502.2| O-methyltransferase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 O-methyltransferase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | O-methyltransferase, putative | chr1:23421182-23422213 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • caffeic O-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative caffeic O-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • O-methyltransferase/ S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | O-methyltransferase family protein | chr1:23417517-23418548 FORWARD LENGTH=286 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Caffeic O-methyltransferase OS=Arabidopsis thaliana GN=At1g63140/F16M19_12 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q9CAM9, Caffeic O-methyltransferase OS=Arabidopsis thaliana GN=At1g63140 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: O-methyltransferase activity [IEA]
    methyltransferase activity [IEA]
    protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENHLQHSLT IIPKPDLIKE EQRYHEDTVS LQAERILHAM TFPMVLKTAL ELGVIDMITS  60
   61 VDDGVWLSPS EIALGLPTKP TNPEAPVLLD RMLVLLASHS ILKYRTVETG DNIGSRKTER 120
  121 VYAAEPVCTF FLNRGDGLGS LATLFMVLQG EVCMKPWEHL KDMILEGKDA FTSAHGMRFF 180
  181 ELIGSNEQFA EMFNRAMSEA STLIMKKVLE VYKGFEDVNT LVDVGGGIGT IIGQVTSKYP 240
  241 HIKGINFDLA SVLAHAPFNK GVEHVSGDMF KEIPKGDAIF MKVSRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 81.39794 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle