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Protein Overview: gi|26449758, gi|...

General Information:
Name(s) found: gi|30689925 [NCBI NR]
gi|26449758 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30689925|ref|NP_197934.2| transcription elongation factor-related [Arabidopsis thaliana] [NCBI NR]
  • gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 735 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNMGTELI DLETVKADSD AFGETNLMEL VGSNDPPSLQ HISVSEIEQE PMEISVSGPL  60
   61 SFQFEPEAVS FQSSMLVDTQ SLMPQLQLPY SVERSVAACS NSVTGKRKSP PESTLSGSAT 120
  121 SEKLDASNKR VEPVHHRPWL EQFYSECIQR GHMPPPATLS TKTEHLPTPA KKVRQMEPAS 180
  181 QKSGKQVMNK KQAGLSQGSV KTLNDGNESL RSKMKESLAA ALALVHEHEE SPKEKKNSET 240
  241 EEASVPVADS NEPASACGTS VTVGEDITPA MSTRDESFEQ KNGNGRTLSQ ESSKDTKMNY 300
  301 VNQSDVQKTQ FDEVFPCDDV RFSDSIFTGD ELLQGNGLSW VLEPVSDFGE NETQKSFEDP 360
  361 ELLASKIELE LFKLFGGVNK KYKEKGRSLL FNLKDKNNPE LRESVMSGKI SPERLCNMTA 420
  421 EELASKELSQ WRQAKAEEMA EMVVLRDTDI DVRNLVRKTH KGEFQVEIDP VDSGTVDVSA 480
  481 EITSNSKPRA KAKSSKSSTK ATLKKNDSND KNIKSNQGTS SAVTLPPTEE IDPMQGLSMD 540
  541 DEMKDVGFLP PIVSLDEFME SLNSEPPFGS PHEHPPGKED PASEKSDSKD GSHSKSPSRS 600
  601 PKQSPKEPSE SVSSKTELEK TNVISPKPDA GDQLDGDVSK PENTSLVDSI KEDRIWDGIL 660
  661 QLSSASVVSV TGIFKSGEKA KTSEWPTMVE VKGRVRLSAF GKFVKELPLS RSRVLMRLGF 720
  721 SLAKTWNPES KKAHC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] MSA 2.224997 View MSA. No confident structure predictions are available.
    2 View Details [169..510] FFAS03 3.98 RNA polymerase II-TFIIS complex
    3 View Details [511..735] MSA 1.21899 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle