| Protein: | gi|26449758, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26449758, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
309.0 | [0..5] | [694..696] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MSSNMGTELI DLETVKADSD AFGETNLMEL VGSNDPPSLQ HISVSEIEQE PMEISVSGPL 60
61 SFQFEPEAVS FQSSMLVDTQ SLMPQLQLPY SVERSVAACS NSVTGKRKSP PESTLSGSAT 120
121 SEKLDASNKR VEPVHHRPWL EQFYSECIQR GHMPPPATLS TKTEHLPT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-510] |
1 11 21 31 41 51
| | | | | |
1 PAKKVRQMEP ASQKSGKQVM NKKQAGLSQG SVKTLNDGNE SLRSKMKESL AAALALVHEH 60
61 EESPKEKKNS ETEEASVPVA DSNEPASACG TSVTVGEDIT PAMSTRDESF EQKNGNGRTL 120
121 SQESSKDTKM NYVNQSDVQK TQFDEVFPCD DVRFSDSIFT GDELLQGNGL SWVLEPVSDF 180
181 GENETQKSFE DPELLASKIE LELFKLFGGV NKKYKEKGRS LLFNLKDKNN PELRESVMSG 240
241 KISPERLCNM TAEELASKEL SQWRQAKAEE MAEMVVLRDT DIDVRNLVRK THKGEFQVEI 300
301 DPVDSGTVDV SAEITSNSKP RAKAKSSKSS TKATLKKNDS ND
|
| Detection Method: | |
| Confidence: | 3.98 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [511-735] |
1 11 21 31 41 51
| | | | | |
1 KNIKSNQGTS SAVTLPPTEE IDPMQGLSMD DEMKDVGFLP PIVSLDEFME SLNSEPPFGS 60
61 PHEHPPGKED PASEKSDSKD GSHSKSPSRS PKQSPKEPSE SVSSKTELEK TNVISPKPDA 120
121 GDQLDGDVSK PENTSLVDSI KEDRIWDGIL QLSSASVVSV TGIFKSGEKA KTSEWPTMVE 180
181 VKGRVRLSAF GKFVKELPLS RSRVLMRLGF SLAKTWNPES KKAHC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
