YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|18377866, gi|...

General Information:
Name(s) found: gi|20856347 [NCBI NR]
gi|18401405 [NCBI NR]
gi|18377866 [NCBI NR]
gi|15620810 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29 [Arabidopsis thaliana] [NCBI NR]
  • gi|18401405|ref|NP_566568.1| RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • gi|18377866|gb|AAL67119.1| AT3g17170/K14A17_29 [Arabidopsis thaliana] [NCBI NR]
  • gi|15620810|dbj|BAB67768.1| RPS6-like protein [Arabidopsis thaliana] [NCBI NR]
  • RPS6-like protein [Arabidopsis thaliana]gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29 [Arabidopsis thaliana]gi|18377866|gb|AAL67119.1| AT3g17170/K14A17_29 [Arabidopsis thaliana]gi|18401405|ref|NP_566568.1| ribosomal protein S6 family protein (RFC3) [A [nrdb_11152004_Chlamydomonas]
  • | Symbols: RFC3 | RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome | chr3:5853192-5854859 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • RPS6-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g17170/K14A17_29 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RFC3 | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr3:5853186-5854853 REVERSE LENGTH=314 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3g17170/K14A17_29 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q8VXX4, AT3g17170/K14A17_29 OS=Arabidopsis thaliana GN=RFC3 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 314 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: ribosome biogenesis [ISS]
    translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLLHASSS LVSLRPRIDG RDSFINPSRV CLNPSLGRRG SKPLPLVAAA KKKKSKKDDN  60
   61 HNFSARPDEA TGPFPESILL KEKKIDEEGD LLPEFADAEE KELYQFLDLQ LQSDLNEERM 120
  121 RHYEVVYLIH EKHAEEVESI NQKVQDYLKE KKGKVWRFSD WGMRRLAYKI QKAENAHYIL 180
  181 MNFEIEAKYL NEFKGLLDSD ERVIRHLVMK RDEAITEDCP PPPEFHSVRA GDEYYDDDEE 240
  241 EEIEEDEDEG EGEDEEDADN IEYEVDDDGN VVMVLYGDEE EGEEEEDGAS EQEEGQDKST 300
  301 NGRRETRRTV NVGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] deduced N/A No confident structure predictions are available.
    2 View Details [120..314] PSI-BLAST 41.09691 70S ribosome functional complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle