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Protein Overview: GYRBM_ARATH

General Information:
Name(s) found: GYRBM_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • DNA gyrase subunit B, mitochondrial OS=Arabidopsis thaliana GN=GYRBM PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 732 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: DNA topological change [IEA][ISS]
    DNA metabolic process [ISS]
    Molecular Function: DNA binding [IEA][ISS]
    ATP binding [IEA][ISS]
    DNA topoisomerase (ATP-hydrolyzing) activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLQRASYL RLYYLRLMGS RPRLFSSSLS PALHRHSSTL SSPPFSSPSP SFRLKFQLTS  60
   61 VLSQRLIQRN AISSRFLSTE ASQETTTSKG YSSEQIQVLE GLDPVRKRPG MYIGSTGSRG 120
  121 LHHLVYEILD NAIDEAQAGY ASKVDVVLHA DGSVSVVDNG RGIPTDLHPA TKKSSLETVL 180
  181 TVLHAGGKFG GTSSGYSVSG GLHGVGLSVV NALSEALEVS VWRDGMEHKQ NYSRGKPITT 240
  241 LTCRVLPLES KGTKGTSIRF WPDKEVFTTA IEFDHNTIAG RIRELAFLNP KVTISLKKED 300
  301 DDPEKTQYSE YSFAGGLTEY VSWLNTDKNP IHDVLGFRRE INGATVDVAL QWCSDAYSDT 360
  361 MLGYANSIRT IDGGTHIEGV KASLTRTLNT LAKKSKTVKE KDISLSGEHV REGLTCIVSV 420
  421 KVPNPEFEGQ TKTRLGNPEV RKIVDQSVQE YLTEFLELHP DILESIISKS LNAYKAALAA 480
  481 KRARELVRSK SVLKSSSLPG KLADCSSTDP EVSEIFIVEG DSAGGSAKQG RDRRFQAILP 540
  541 LRGKILNIER KDEAAMYKNE EIQNLILGLG LGVKGEDFKK ENLRYHKIII LTDADVDGAH 600
  601 IRTLLLTFFF RYQRALFDAG CIYVGVPPLF KVERGKNAQY CYDDADLKKI TSNFPANASY 660
  661 NIQRFKGLGE MMPEQLWETT MNPETRILKQ LVVDDIAEAN MTFSSLMGAR VDVRKELIKN 720
  721 AATRINLQRL DI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] deduced N/A No confident structure predictions are available.
    2 View Details [88..491] PSI-BLAST 147.0 DNA gyrase B
    3 View Details [492..732] PSI-BLAST 49.69897 TOPOISOMERASE RESIDUES 410-1202,


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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