| Protein: | GYRBM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 732 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GYRBM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
861.0 | [0..88] | [732..6] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MALLQRASYL RLYYLRLMGS RPRLFSSSLS PALHRHSSTL SSPPFSSPSP SFRLKFQLTS 60
61 VLSQRLIQRN AISSRFLSTE ASQETTT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-491] |
1 11 21 31 41 51
| | | | | |
1 SKGYSSEQIQ VLEGLDPVRK RPGMYIGSTG SRGLHHLVYE ILDNAIDEAQ AGYASKVDVV 60
61 LHADGSVSVV DNGRGIPTDL HPATKKSSLE TVLTVLHAGG KFGGTSSGYS VSGGLHGVGL 120
121 SVVNALSEAL EVSVWRDGME HKQNYSRGKP ITTLTCRVLP LESKGTKGTS IRFWPDKEVF 180
181 TTAIEFDHNT IAGRIRELAF LNPKVTISLK KEDDDPEKTQ YSEYSFAGGL TEYVSWLNTD 240
241 KNPIHDVLGF RREINGATVD VALQWCSDAY SDTMLGYANS IRTIDGGTHI EGVKASLTRT 300
301 LNTLAKKSKT VKEKDISLSG EHVREGLTCI VSVKVPNPEF EGQTKTRLGN PEVRKIVDQS 360
361 VQEYLTEFLE LHPDILESII SKSLNAYKAA LAAKRARELV RSKS
|
| Detection Method: | |
| Confidence: | 147.0 |
| Match: | 1ei1A |
| Description: | DNA gyrase B |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [492-732] |
1 11 21 31 41 51
| | | | | |
1 VLKSSSLPGK LADCSSTDPE VSEIFIVEGD SAGGSAKQGR DRRFQAILPL RGKILNIERK 60
61 DEAAMYKNEE IQNLILGLGL GVKGEDFKKE NLRYHKIIIL TDADVDGAHI RTLLLTFFFR 120
121 YQRALFDAGC IYVGVPPLFK VERGKNAQYC YDDADLKKIT SNFPANASYN IQRFKGLGEM 180
181 MPEQLWETTM NPETRILKQL VVDDIAEANM TFSSLMGARV DVRKELIKNA ATRINLQRLD 240
241 I
|
| Detection Method: | |
| Confidence: | 49.69897 |
| Match: | 1bgwA |
| Description: | TOPOISOMERASE RESIDUES 410-1202, |
Matching Structure (courtesy of the PDB): |
|
