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Protein Overview: MRG1_ARATH

General Information:
Name(s) found: MRG1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Protein MRG1 OS=Arabidopsis thaliana GN=MRG1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 320 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chromatin [IEA]
    Biological Process: chromatin assembly or disassembly [IEA]
    Molecular Function: chromatin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSKEETA SDGDTASGGA SPSNDGRLFS EGERVLAYHG PRVYGAKVQK VELRKKEWKY  60
   61 FVHYLGWNKN WDEWVSADRL LKHTEENLVK QKALDKKQGV EKGTKSGRSA QTKTRSSADT 120
  121 KADKDDTKTN AAKGKKRKHE SGNEKDNVTA EKLMKIQIPA SLKKQLTDDW EYIAQKDKVV 180
  181 KLPRSPNVDE ILSKYLEFKT KKDGMVTDSV AEILKGIRSY FDKALPVMLL YKKERRQYQE 240
  241 SIVDDTSPST VYGAEHLLRL FVKLPDLFSY VNMEEETWSR MQQTLSDFLK FIQKNQSTFL 300
  301 LPSAYDSDKV SDGKGKGKDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 21.522879 No description for 2efiA was found.
    2 View Details [125..320] PSI-BLAST 55.69897 Crystal Structure of the MRG15 MRG domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription repressor activity
    		•  4.08500855631983 bayes_pls_golite062009
  • chromatin binding
    		•  3.84065302930105 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.64390820819794 bayes_pls_golite062009
  • methylated histone residue binding
    		•  3.42338304360938 bayes_pls_golite062009
  • binding
    		•  3.06758476214113 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.19167058827256 bayes_pls_golite062009
  • DNA binding
    		•  2.05514577638135 bayes_pls_golite062009
  • histone binding
    		•  2.00388175060339 bayes_pls_golite062009
  • protein binding
    		•  1.61683263008775 bayes_pls_golite062009
  • satellite DNA binding
    		•  1.4681464542396 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.998957812785999 bayes_pls_golite062009
  • general transcriptional repressor activity
    		•  0.75184432495983 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.726970683178132 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  0.494788451379878 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.294457188332415 bayes_pls_golite062009
  • catalytic activity
    		•  0.14067200158938 bayes_pls_golite062009
  • transcription activator activity
    		•  0.136090220479238 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle