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Protein Overview: DHQS_ARATH

General Information:
Name(s) found: DHQS_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • 3-dehydroquinate synthase, chloroplastic OS=Arabidopsis thaliana GN=DHQS PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: aromatic amino acid family biosynthetic process [IEA]
    Molecular Function: 3-dehydroquinate synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANTISLSN VAASKNLNSF QSRAFIAPPT IFFPVASAKS KPGELSLSST TLSRSRVRAG  60
   61 ASQLMNEPLN DQRSISSPTV VEVDLGDRSY PIYIGAGLLD HSELLQRHVH GKRVLVVTND 120
  121 RVAPLYLDKT IDALTRGNPN VTVESVILPD GEKYKDMDTL MKVFDKAIES RLDRRCTFVA 180
  181 LGGGVIGDMC GYAAASYLRG VNFIQIPTTV MAQVDSSVGG KTGINHRLGK NLIGAFYQPQ 240
  241 CVLVDTDTLN TLPDREMASG LAEVIKYGLI RDAEFFEWQE KNIEALLARD PAALAFAIKR 300
  301 SCENKADVVS QDEKESGLRA TLNLGHTFGH AIETGFGYGE WLHGEAVAAG TVMAVDMSYR 360
  361 LGWIDESIVK RVNKILVRAK LPTTPPESMT VSMFKSIMAV DKKVADGLLR LILLKGPLGN 420
  421 CVFTGDYDRE ALDATLRAFS KS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] MSA 2.067995 View MSA. No confident structure predictions are available.
    2 View Details [75..442] PSI-BLAST 66.0 Dehydroquinate synthase, DHQS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  2.74401602170192 bayes_pls_golite062009
  • 3-dehydroquinate synthase activity
    		•  2.74084565855098 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.95599923468797 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.93261339792959 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  1.57272461554663 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.29330307870321 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.0292631371096151 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle