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Protein Overview: gi|229606911, gi...

General Information:
Name(s) found: gi|229606911 [NCBI NR]
gi|229369566 [NCBI NR]
Description(s) found:
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  • gi|229606911|ref|YP_002877559.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX [Vibrio cholerae MJ-1236] [NCBI NR]
  • gi|229369566|gb|ACQ59989.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX [Vibrio cholerae MJ-1236] [NCBI NR]
  • 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX OS=Vibrio cholerae serotype O1 (strain MJ-1236) GN=VCD_001820 PE=4 SV=1 [vibrio_cholerae.fasta]
    • Organism: Vibrio cholerae MJ-1236
    Length: 211 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMNNNRTIT LAWTGASGAP YGLRLLQCLL AADYQVYLLI SSAARVVLAT EHGLKLPANP  60
   61 EAAQAALVEH LGCASDKLVV CGKEDWFSPV ASGSAAPKQM VVCPCSAGSV AAIAHGMSDN 120
  121 LIERAADVVL KERGQLLLVV RETPFSTLHL ENMLKLSHMG VTIMPAAPGF YHQPQSIDDL 180
  181 VDFMVARILD HLGIEQALVP RWGYDQRVRG E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] PSI-BLAST 56.522879 Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
    		•  5.88631349530005 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  2.27469953971238 bayes_pls_golite062009
  • catalytic activity
    		•  1.88716391063227 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.67751595868044 bayes_pls_golite062009
  • phosphopantothenoylcysteine decarboxylase activity
    		•  1.6488492075417 bayes_pls_golite062009
  • lyase activity
    		•  0.646446561158526 bayes_pls_golite062009
  • phosphopantothenate--cysteine ligase activity
    		•  0.35505046579356 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle