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Protein Overview: gi|18421544, gi|...

General Information:
Name(s) found: gi|22531269 [NCBI NR]
gi|18421544 [NCBI NR]
gi|16323077 [NCBI NR]
Description(s) found:
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  • gi|22531269|gb|AAM97138.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18421544|ref|NP_568534.1| eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16323077|gb|AAL15273.1| AT5g36230/T30G6_9 [Arabidopsis thaliana] [NCBI NR]
  • putative protein [Arabidopsis thaliana]gi|16323077|gb|AAL15273.1| AT5g36230/T30G6_9 [Arabidopsis thaliana]gi|18421544|ref|NP_568534.1| eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein | chr5:14290749-14294003 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • translation initiation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g36230/T30G6_9 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ARM repeat superfamily protein | chr5:14273519-14276773 FORWARD LENGTH=411 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g36230/T30G6_9 OS=Arabidopsis thaliana GN=At5g36230 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 411 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: regulation of translational initiation [ISS]
    Molecular Function: translation initiation factor activity [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKEKPTLG GTRIKTRKRN IAAPLDPAAF SDAVVQIYHD NAGDLELVAK SIESSDLNFT  60
   61 RYGDIFFEVI FIGGRTQPGT VKSDEGERHT YSVIDCEPKR EAILPSVVYI QKILRRKPFL 120
  121 IKNLENVTRR FLQSLELFEE NERKKLAIFT ALAFSQKLSG LPPETVFQPL LKDNLVAKGI 180
  181 VLSFVTDFFK EYLVENSLED LISILRRGKM EDNLMDFLPP VRRSAESFAE HFTNEGLTDL 240
  241 VEYHSKKMFE VKLREIKTVL TSKVTEESNV DEVIESVKQQ IKDAKLPDIE VVRVVWDGLM 300
  301 DAVQWSGKNQ QQNANSVLRQ VKTWAPLLNT FCTSGKLELE LMYKVQMQCY EDAKLMKVFP 360
  361 EVVRSLYELD VLAEDTILHW FRKGTNSKGR QTFVKSLEPF VNWLEEAEEE E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..411] PSI-BLAST 71.69897 C-terminal portion of human eIF4GI


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle