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View Structure Prediction Details

Protein: gi|18421544, gi|...
Organism: Arabidopsis thaliana
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18421544, gi|....

Description E-value Query
Range
Subject
Range
gi|74005117 - gi|74005117|ref|XP_849107.1| PREDICTED: similar to basic leucine zipper and W2 domains 1 isoform 3 [...
426.0 [0..3] [406..37]

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Predicted Domain #1
Region A:
Residues: [1-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKEKPTLG GTRIKTRKRN IAAPLDPAAF SDAVVQIYHD NAGDLELVAK SIESSDLNFT  60
   61 RYGDIFFEVI FIGGRTQPGT VKSDEGERHT YSVIDCEPKR EAILPSVVYI QKILRRKPFL 120
  121 IKNLENVTRR FLQSLELFEE NERKKLAIFT ALAFSQKLSG LPPETVFQPL LKDNLVAKGI 180
  181 VLSFVTDFFK EYLVENSLED LISILRRGKM EDNLMDFLPP VRRSAESFAE HFTNEGLTDL 240
  241 VEYHSKKMFE VKLREIKTVL TSKVTEESNV DEVIESVKQQ IKDAKLPDIE VVRVVWDGLM 300
  301 DAVQWSGKNQ QQNANSVLRQ VKTWAPLLNT FCTSGKLELE LMYKVQMQCY EDAKLMKVFP 360
  361 EVVRSLYELD VLAEDTILHW FRKGTNSKGR QTFVKSLEPF VNWLEEAEEE E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.69897
Match: 1ug3A
Description: C-terminal portion of human eIF4GI
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle