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Protein Overview: BAM6_ARATH

General Information:
Name(s) found: BAM6_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Beta-amylase 6 OS=Arabidopsis thaliana GN=BAM6 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 577 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: carbohydrate metabolic process [IEA]
    polysaccharide catabolic process [IEA]
    Molecular Function: beta-amylase activity [IEA][ISS]
    catalytic activity [IEA]
    cation binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVLGMMNP NLINGRNLHK GSSIFVQDKE TKKRVQWRLS IKEGSLRTHQ ATASSATEPK  60
   61 ATEFNTTTYE DKMLTNYVPV YVMLQLGVIT NDNVLENEES LKKQLKKLKQ SQVDGVMVDV 120
  121 WWGIVESKGP KQYQWSAYRN LFAIVQSFGL KLQAIMSFHR CGGNIGDDVN IPIPKWVLEI 180
  181 GDSNPDIFYT NKSGNRNKEC LSLSVDNLSL FRGRTAVEMY RDYMKSFREN MEDFISSGVI 240
  241 IDIEVGLGPA GELRYPSYSE TQGWVFPGIG EFQCYDKYLR SDYEEEVRRI GHPEWKLPEN 300
  301 AGEYNSVPGE TEFFEYSNGT YLKEEGNFFL SWYSKKLLLH GDQILDEANK VFLGCKLKIA 360
  361 AKVSGIHWWY KTESHAAELT AGYYNLKNRD GYRAIAKIMR RHHAILNFTC LEMKNTEQPA 420
  421 KAKSGPQELV QQVLSSGWRE GIEVAGENAL PRFDRNGYNQ IILNARPNGV NQDGKPRMFG 480
  481 FTYLRLSDKL LNEPNFSTFK MFLKRMHANQ EYCSEPERYN HELLPLERSR NDESLEMFME 540
  541 ETEPFDPFPW LDETDMSIRP FESVLSLLRS TFLRKKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..577] PSI-BLAST 1000.0 Crystal structure of soybean beta-amylase mutant substituted at surface region

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle