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Protein Overview: gi|254912395

General Information:
Name(s) found: gi|254912395 [NCBI NR]
Description(s) found:
  • gi|254912395|ref|ZP_05262407.1| dihydroorotase [Listeria monocytogenes J2818] [NCBI NR]
    • Organism: Listeria monocytogenes J2818
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVLKNGQVL NASGKLESKD VLIQNGKVNL IADSIEVTSG EEFDATGKLI TPGFIDVHVH  60
   61 LREPGGEHKE TILTGTKAAA RGGYTTICSM PNTKPVPDSK EVMESIQAKI KETAKVRVLP 120
  121 YASITTSLGT DELVDFEALK EAGAFAFTDD GVGVQLAGTM YEAMKRAAAL DMAIVAHCED 180
  181 NSLIYGGVVH DGIFAEKEGL KGIPNIAESV QIARDVLLAE AAGCHYHVCH ISTKESVRVV 240
  241 RDAKRAGIRV TAEVSPHHLI LDEEAIPGND GNWKMNPPLR SKEDRAALLE GLLDGTIDFI 300
  301 ATDHAPHAAE EKNVPMEQAA FGIVGLETAF PLLYTHFVKT NEWTLKQLID WMTVKPAECF 360
  361 KLPYGKLEEG SVADIVVLDL EKEANIDPDT FYSKGKNTPF VGETCIGWPV ATFAEGTLVY 420
  421 NEGEIK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..426] PSI-BLAST 83.0 The Crystal Structure of a Novel, Latent Dihydroorotase from Aquifex aeolicus at 1.7 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uracil binding
    		•  2.6045173443981 bayes_pls_golite062009
  • pyrimidine binding
    		•  2.6045173443981 bayes_pls_golite062009
  • allantoinase activity
    		•  2.45571277189844 bayes_pls_golite062009
  • dihydroorotase activity
    		•  2.32070383330692 bayes_pls_golite062009
  • dihydropyrimidinase activity
    		•  2.27856136692645 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  2.20489529944693 bayes_pls_golite062009
  • hydrolase activity
    		•  2.17584977880576 bayes_pls_golite062009
  • deaminase activity
    		•  1.79186203771221 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.60895003474033 bayes_pls_golite062009
  • adenine deaminase activity
    		•  1.4081199504179 bayes_pls_golite062009
  • thymine binding
    		•  1.34528530211689 bayes_pls_golite062009
  • AMP deaminase activity
    		•  0.8498975324894 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.573107361273483 bayes_pls_golite062009
  • binding
    		•  0.420164638111423 bayes_pls_golite062009
  • guanine deaminase activity
    		•  0.134430884998957 bayes_pls_golite062009
  • protein binding
    		•  0.0854348074331311 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle