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Protein Overview: ORC1A_ARATH

General Information:
Name(s) found: ORC1A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|38567372|emb|CAD13174.1| origin recognition complex 1a protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18414287|ref|NP_567440.1| ORC1A (ORIGIN RECOGNITION COMPLEX 1); DNA binding / double-stranded methylated DNA binding [Arabidopsis thaliana] [NCBI NR]
  • Origin of replication complex subunit 1A OS=Arabidopsis thaliana GN=ORC1A PE=1 SV=1 [Swiss-Prot]
  • origin recognition complex 1a protein [Arabidopsis thaliana]gi|18414287|ref|NP_567440.1| replication control protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Replication control protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATORC1A, ORC1A | ATORC1A/ORC1A (ORIGIN OF REPLICATION COMPLEX 1A); DNA binding | chr4:8422231-8424660 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • origin recognition complex 1a protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ORC1 (origin recognition complex 1); ATP binding / DNA binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATORC1A, ORC1A | origin recognition complex 1 | chr4:8422236-8424665 FORWARD LENGTH=809 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Origin recognition complex 1a protein OS=Arabidopsis thaliana GN=ORC1A PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 809 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    origin recognition complex [ISS]
    Biological Process: DNA replication [ISS]
    regulation of transcription [IMP]
    Molecular Function: DNA binding [ISS]
    double-stranded methylated DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLSSKAK TFKSPTKTPT KMYRKSYLSP SSTSLTPPQT PETLTPLRRS SRHVSRKINL  60
   61 GNDPIDLPGK ESVEEINLIR KPRKRTNDIV VAEKSKKKKI DPEVSFSPVS PIRSETKKTK 120
  121 KKKRVYYNKV EFDETEFEIG DDVYVKRTED ANPDEEEEED PEIEDCQICF KSHTNTIMIE 180
  181 CDDCLGGFHL NCLKPPLKEV PEGDWICQFC EVKKSGQTLV VVPKPPEGKK LARTMKEKLL 240
  241 SSDLWAARIE KLWKEVDDGV YWIRARWYMI PEETVLGRQR HNLKRELYLT NDFADIEMEC 300
  301 VLRHCFVKCP KEFSKASNDG DDVFLCEYEY DVHWGSFKRV AELADGDEDS DQEWNGRKEE 360
  361 EIDYSDEEIE FDDEESVRGV SKSKRGGANS RKGRFFGLEK VGMKRIPEHV RCHKQSELEK 420
  421 AKATLLLATR PKSLPCRSKE MEEITAFIKG SISDDQCLGR CMYIHGVPGT GKTISVLSVM 480
  481 KNLKAEVEAG SVSPYCFVEI NGLKLASPEN IYSVIYEGLS GHRVGWKKAL QSLNERFAEG 540
  541 KKIGKENEKP CILLIDELDV LVTRNQSVLY NILDWPTKPN SKLVVLGIAN TMDLPEKLLP 600
  601 RISSRMGIQR LCFGPYNHRQ LQEIISTRLE GINAFEKTAI EFASRKVAAI SGDARRALEI 660
  661 CRRAAEVADY RLKKSNISAK SQLVIMADVE VAIQEMFQAP HIQVMKSVSK LSRIFLTAMV 720
  721 HELYKTGMAE TSFDRVATTV SSICLTNGEA FPGWDILLKI GCDLGECRIV LCEPGEKHRL 780
  781 QKLQLNFPSD DVAFALKDNK DLPWLANYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] deduced N/A No confident structure predictions are available.
    2 View Details [147..228] PSI-BLAST 13.522879 No description for 2ysmA was found.
    3 View Details [229..290] FFAS03 2.81 Crystal structure of the proximal BAH domain of polybromo
    4 View Details [291..809] PSI-BLAST 59.0 The crystal structure of murine p97/VCP at 3.6A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.237569247811196 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle