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Protein Overview: RHD3_ARATH

General Information:
Name(s) found: RHD3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|22136246|gb|AAM91201.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20260178|gb|AAM12987.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|1839188|gb|AAB58375.1| root hair defective 3 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231390|ref|NP_188003.1| RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding [Arabidopsis thaliana] [NCBI NR]
  • Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana GN=RHD3 PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|20260178|gb|AAM12987.1| unknown protein [Arabidopsis thaliana]gi|1839188|gb|AAB58375.1| root hair defective 3 [Arabidopsis thaliana]gi|15231390|ref|NP_188003.1| root hair defective 3 (RHD3) [Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Root hair defective 3 (RHD3) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RHD3 | RHD3 (ROOT HAIR DEFECTIVE 3) | chr3:4565769-4571116 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RHD3 (ROOT HAIR DEFECTIVE 3) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • root hair defective 3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RHD3 | Root hair defective 3 GTP-binding protein (RHD3) | chr3:4565762-4571109 REVERSE LENGTH=802 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 802 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    endoplasmic reticulum [IDA]
    plasma membrane [IDA]
    Biological Process: root epidermal cell differentiation [IMP]
    ER to Golgi vesicle-mediated transport [IMP]
    actin cytoskeleton organization [IMP]
    cell tip growth [IMP]
    plant-type cell wall biogenesis [IMP]
    Molecular Function: GTP binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAACSTQLI DGDGVFNVSG VDHFIKEVKL DECGLSYAVV SIMGPQSSGK STLLNHLFGT  60
   61 NFREMDAFRG RSQTTKGIWI ARCAGIEPCT VVMDLEGTDG RERGEDDTAF EKQSALFALA 120
  121 VSDIVLINMW CHDIGREQAA NKPLLKTVFQ VMMRLFSPRK TTLMFVIRDK TRTPLENLEP 180
  181 VLREDIQKIW DSVPKPQAHK ETPLSDFFNV EVVALSSYEE KEEQFKEQVY NLRQRFFQSV 240
  241 APGGLAGDRR GVVPANAFAF SAKQMWQVIK DNKDLDLPAH KVMVATVRCE EIANEKFSSF 300
  301 IANENWRELE EAVQSGPVSG FGRKLSSILQ ASLSEYDTEA TYFEESVRSS KRQQLQEKLL 360
  361 QLVQPTFQDV LGHLRAGALE NFKNAFEKAL DAGEGFSSSA KSCAQSCISK FDKGCEEAVI 420
  421 EQAKWDTSKT REKLERDIEA HISSVRTAKL AELTTLYESK LNVALSGPVE ALLDGANDET 480
  481 WPAIRKLLRR EGELAVYGLS NALSGFEMDE ETRSKMLADL ENYARGIVET KAKEEAGRAM 540
  541 MRMKDRFATI FSHDSDSMPR VWTGKEDIRA ITKMARSASL KLLSVMAVIR LDDELDNIEK 600
  601 TLTLALFNST GNNATSKSIS TIDSLASSTW EKVAPEKTLI TPVQCKSLWR QFKNETEYTV 660
  661 TQAISAQEAN RRNNNWLPPP WAILALVVLG FNEFMTLLRN PLWLLVLFVG YLVSKALWVQ 720
  721 LNISGEFQNG VLPGLLSLST KFIPTVMNLL KKLAEEGQAP PTNSNQSMNS TAQSEVTTNG 780
  781 ESSSSSSSGS SPAKNVPIDT SA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..550] PSI-BLAST 39.30103 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
    2 View Details [551..677] PSI-BLAST 10.69897 Heavy meromyosin subfragment
    3 View Details [678..802] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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