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Protein Overview: BASS3_ARATH

General Information:
Name(s) found: BASS3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|22136206|gb|AAM91181.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19698909|gb|AAL91190.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18404505|ref|NP_566764.1| bile acid:sodium symporter family protein [Arabidopsis thaliana] [NCBI NR]
  • Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Arabidopsis thaliana GN=BASS3 PE=2 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|19698909|gb|AAL91190.1| unknown protein [Arabidopsis thaliana]gi|18404505|ref|NP_566764.1| bile acid:sodium symporter family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Bile acid:sodium symporter family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | bile acid:sodium symporter family protein | chr3:9215802-9217568 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • bile acid:sodium symporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Sodium Bile acid symporter family | chr3:9214565-9216331 REVERSE LENGTH=431 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 431 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    membrane [IEA][ISS]
    Biological Process: sodium ion transport [IEA][ISS]
    Molecular Function: bile acid:sodium symporter activity [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLIASLSLP PPAIQRQSLS EFHNLPAKSQ SFNCQFRSSS SPLSSLHSSS LSNFLDFRLR  60
   61 RRNSGLVPVV ACSTTPFMGR VGLHWRDGNM SLLSFCGGTD VTEKADSSQF WSALLPFVVA 120
  121 LTAVAALSYP PSFTWVSKDL YAPALGGIML SIGIQLSVDD FALAFKRPVP LSVGFVAQYV 180
  181 LKPLLGVLVA NAFGMPRTFY AGFILTCCVA GAQLSSYASS LSKADVAMSI LLTSSTTIAS 240
  241 VIFTPLLSGL LIGSVVPVDA VAMSKSILQV VLVPITLGLV LNTYAKPVVT LLQPVMPFVA 300
  301 MVCTSLCIGS PLSINRSQIL SAEGLGLIVP IVTFHAVAFA LGYWFSKIPG LRQEEEVSRT 360
  361 ISLCTGMQSS TLAGLLASQF LGSSQAVPAA CSVVVMAIMG LCLASFWGNG FRIRDVLSLS 420
  421 TPQSTGYTAE S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A No confident structure predictions are available.
    2 View Details [99..333] Pfam 33.886057 No description for PF01758.7 was found. No confident structure predictions are available.
    3 View Details [334..431] MSA 6.463995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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