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Protein Overview: C3H24_ARATH

General Information:
Name(s) found: C3H24_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis thaliana GN=At2g28450 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 809 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: RNA processing [IEA]
    Molecular Function: nucleic acid binding [IEA][ISS]
    RNA methyltransferase activity [IEA]
    zinc ion binding [IEA]
    methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSSIEINE LPLATKTQTP PASVEPIPME TSSIDELPSS DSNATDNIEA VGEKRKRADE  60
   61 DEKTNLESSD TKITTPSPWW KTSLCSYFRR EASCSHGNEC KYAHGEAELR MKPDNTWDPT 120
  121 SERGKKAKAM KMSEHEEKEE DEVLFTEQMM ESIDGDEGGG GSVSVVDLSL SKCLVHLPNK 180
  181 WQSDELKKFL GEQGVLYKSA KKRRGMIVGF VTFENAEQLQ SGVEILDGKT VNSSNLKIAD 240
  241 VLPRTFDKND ARKSVKSARD AVTPLAYLSY ADQLEQKKTS IGQMLKKLAR NARKACPNGN 300
  301 SLPQWVLTSR DRGGLACNLE GIIESPITNG YRNKCEFSVG LSLQGKPTVG FSLGSFCAGV 360
  361 TAVEEPVDCP NVSKIASQYA SIFQKFIENS KFQVWNRFQH SGFWRQLTVR EGRKPGVFSN 420
  421 DEDAITRIAE VMLMVQVCLT GSDEAEVATE FEELAKAFAE GARASSPTLP LTVLVVQNHS 480
  481 GISNVAPPDA PLQVLAIPIS DNGTDQEQTT NVLTEARIHD HINNLRFSIS PTAFFQVNTV 540
  541 TAEKLYSIAG DWADLGPDTL LFDVCCGTGT IGLTLAHRVG MVIGIEMNAS AVADAERNAT 600
  601 INGISNCKFI CSKAEDVMSS LLKQYLDVTQ MEEAKPLSNA NDDLNKQIPS TEEMTNSEHV 660
  661 ADQNLPPSNT QVEELQDNEQ KDSSSLEPEK TTKPQFKNVV AIVDPPRSGL HPAVIKALRT 720
  721 HPRLKRLVYI SCNPETLVAN AIELCTPSFD EPDRGNKNYR GRKKIGIAAL ARHRAKSMPT 780
  781 SEAFRPVKAM AVDLFPHTDH CEMVMLLER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] PSI-BLAST 14.39794 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
    2 View Details [168..709] PSI-BLAST 65.045757 Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase
    3 View Details [710..809] PSI-BLAST 20.522879 Crystal structure of human Dimethyladenosine transferase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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