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Protein Overview: HBA_DANRE

General Information:
Name(s) found: HBA_DANRE [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Hemoglobin subunit alpha OS=Danio rerio GN=hbaa1 PE=2 SV=3 [Swiss-Prot]
    • Organism: Danio rerio
    Length: 143 amino acids

    Gene Ontology:
    Cellular Component: hemoglobin complex [IEA][NAS]
    Biological Process: response to hypoxia [IDA]
    oxygen transport [IEA]
    hemopoiesis [NAS]
    transport [IEA]
    Molecular Function: oxygen binding [IEA]
    iron ion binding [IEA]
    metal ion binding [IEA]
    oxygen transporter activity [IEA]
    heme binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSDTDKAV VKAIWAKISP KADEIGAEAL ARMLTVYPQT KTYFSHWADL SPGSGPVKKH  60
   61 GKTIMGAVGE AISKIDDLVG GLAALSELHA FKLRVDPANF KILSHNVIVV IAMLFPADFT 120
  121 PEVHVSVDKF FNNLALALSE KYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] PSI-BLAST 40.69897 Hemoglobin, alpha-chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxygen transporter activity
    		•  12.7518923261978 bayes_pls_golite062009
  • hemoglobin binding
    		•  7.80994828423656 bayes_pls_golite062009
  • oxygen binding
    		•  7.60582561525971 bayes_pls_golite062009
  • hemoglobin alpha binding
    		•  6.6133698394882 bayes_pls_golite062009
  • organic acid binding
    		•  4.76461807092667 bayes_pls_golite062009
  • hemoglobin beta binding
    		•  3.70103281638942 bayes_pls_golite062009
  • transporter activity
    		•  2.30531874940611 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.13533596372692 bayes_pls_golite062009
  • binding
    		•  1.61998555357457 bayes_pls_golite062009
  • protein binding
    		•  1.50013290504406 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  0.436801914510671 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle