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Protein Overview: AGD13_ARATH

General Information:
Name(s) found: AGD13_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|89000963|gb|ABD59071.1| At4g05330 [Arabidopsis thaliana] [NCBI NR]
  • gi|75155915|sp|Q8LFN9.1|AGD13_ARATH RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD13; AltName: Full=Protein ARF-GAP DOMAIN 13; Short=AtAGD13 [NCBI NR]
  • gi|21536965|gb|AAM61306.1| putative zinc finger and C2 domain protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18412932|ref|NP_567292.1| AGD13 (ARF-GAP domain 13); ARF GTPase activator/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1 [Swiss-Prot]
  • putative zinc finger and C2 domain protein [Arabidopsis thaliana]gi|18412932|ref|NP_567292.1| zinc finger and C2 domain protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zinc finger and C2 domain protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGD13 | AGD13 (ARF-GAP DOMAIN 13); ARF GTPase activator/ zinc ion binding | chr4:2720769-2722676 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative zinc finger and C2 domain protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g05330 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AGD13 | ARF-GAP domain 13 | chr4:2720772-2722679 REVERSE LENGTH=336 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 336 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of ARF GTPase activity [IEA]
    Molecular Function: zinc ion binding [IEA]
    ARF GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL  60
   61 GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL PDTCSKPGPD VNHDQRMRFI 120
  121 RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG 180
  181 LLKVTIKKGT NLAIRDMMSS DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP 240
  241 VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS 300
  301 IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..336] PSI-BLAST 25.0 Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle