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View Structure Prediction Details

Protein: AGD13_ARATH
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD13_ARATH.

Description E-value Query
Range
Subject
Range
gi|25407332, gi|... - gi|7267293|emb|CAB81075.1| putative protein [Arabidopsis thaliana], pir||A85067 hypothetical protein...
221.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYAAGLGK PGSGKRRIRD LLNQPDNRVC ADCGASDPKW ASANIGVFIC LKCCGVHRSL  60
   61 GTHISKVLSV TLDEWSDEEV DSMIEIGGNA SANSIYEAFL PDTCSKPGPD VNHDQRMRFI 120
  121 RAKYELQEFL KPSLRITSGK GSTKSSAFLT SSLSRKIMDS FRTNSSSQTM FQEGMVEFIG 180
  181 LLKVTIKKGT NLAIRDMMSS DPYVVLNLGK QKLQTTVMNS NLNPVWNQEL MLSVPESYGP 240
  241 VKLQVYDYDT FSADDIMGEA DIDIQPLITS AMAFGDPEMF GDMQIGKWLK SHDNPLIDDS 300
  301 IINIVDGKVK QEVQIKLQNV ESGELELEME WLPLDQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 1dcqA
Description: Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle