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Protein Overview: gi|19699100, gi|...

General Information:
Name(s) found: gi|22329715 [NCBI NR]
gi|21928029 [NCBI NR]
gi|19699100 [NCBI NR]
Description(s) found:
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  • gi|22329715|ref|NP_173580.2| wound-responsive family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21928029|gb|AAM78043.1| At1g21610/F24J8_11 [Arabidopsis thaliana] [NCBI NR]
  • gi|19699100|gb|AAL90916.1| At1g21610/F24J8_11 [Arabidopsis thaliana] [NCBI NR]
  • At1g21610/F24J8_11 [Arabidopsis thaliana]gi|19699100|gb|AAL90916.1| At1g21610/F24J8_11 [Arabidopsis thaliana]gi|22329715|ref|NP_173580.2| wound-responsive family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Wound-responsive family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | wound-responsive family protein | chr1:7574093-7578632 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g21610/F24J8_11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | wound-responsive family protein | chr1:7574104-7578643 FORWARD LENGTH=684 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g21610/F24J8_11 OS=Arabidopsis thaliana GN=At1g21610 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4HY28, At1g21610/F24J8_11 OS=Arabidopsis thaliana GN=At1g21610 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 684 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to wounding [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVNEMSGG SIGGELLRAS PKVLTAGDRK LLKVELRPGD TTYVSWKKLM RDAGKVNGLS  60
   61 ASVPDPPPNA NPNLEFRIAP GHPVEIETNE QPHSNRFNAV IEKIERLYKG NDSSDGEELD 120
  121 GAPDDDEYDT EDSFIDDAEL DEYFEVDNST VKHDGFYVNR GKLERMEPST TSNQQPKKRR 180
  181 RKDSAKPCRD AVDVSDKHTK LSITARKKDQ STAPGSWKTQ ESPLPSGAQD ANTSVPLDDV 240
  241 KHSDRANHQS RNDTSHKSRE TGSSSALHQK YSNKSLHQQS TSLLGKSPPN VFAEVTVVRQ 300
  301 KENNGMHQLA NVTGSRQSSQ ASKKDGSNVK SKTSILEKAI RELEKVVVES RPPAITENQE 360
  361 ADTSSQAVKR RLPRDVKLKL AKVARIAQAS QGKHSTELIN RLMSIVGHLI QLRSLKRNLK 420
  421 IMIDMGDSAT REKDTRFKQI NNEVLDMIKA KVSLMESQAI KPEGATSDDF QDSVEKPSLK 480
  481 KFVMDAALED KLCDLYDIFI DGLDEDQGPQ TKKLYVNLAE LWPNRLMDYR GIKHAIFRAK 540
  541 ERRKALYGNL AKEMDQTKMK KSMKQLVPRT DCTAQPNTEL VVQRQHSGEK KLIVDPNATS 600
  601 TSVVTSQTMV DRSNQQQPEK LKGISSSCNP TEETRVVKRK NEAVMAEKQV VLALKKPEHP 660
  661 QTRVIPAPQN LNIPRTTPDL NLPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] MSA 4.104996 View MSA. No confident structure predictions are available.
    2 View Details [169..391] MSA 4.113997 View MSA. No confident structure predictions are available.
    3 View Details [392..575] MSA 2.061989 View MSA. No confident structure predictions are available.
    4 View Details [576..684] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle