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Protein Overview: gi|55925452, gi|...

General Information:
Name(s) found: gi|55925452 [NCBI NR]
gi|21322371 [NCBI NR]
gi|125842297 [NCBI NR]
Description(s) found:
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  • gi|55925452|ref|NP_001002504.2| HECT domain containing 1 [Danio rerio] [NCBI NR]
  • gi|21322371|emb|CAD32862.1| novel protein with HECT-domain (ubiquitin-transferase) [Danio rerio] [NCBI NR]
  • gi|125842297|ref|XP_001337811.1| PREDICTED: hypothetical protein [Danio rerio] [NCBI NR]
  • novel protein with HECT-domain (ubiquitin-transferase) [Danio rerio] [nrdb_11152004_Chlamydomonas]
  • HECT domain containing 1 [Danio rerio] [nr-271106-contam.fasta]
  • E3 ubiquitin-protein ligase HECTD1 [Danio rerio] [NCBI-RefSeq_D_rerio_na_08-30-2010_reversed.fasta]
  • Novel protein with HECT-domain (Ubiquitin-transferase) OS=Danio rerio GN=hectd1 PE=4 SV=1 [uniprot-Danio-rerio-zebrafish-April2015-contam.fasta]
  • Novel protein with HECT-domain (Ubiquitin-transferase) OS=Danio rerio GN=hectd1 PE=1 SV=1 [DANRE.fasta.20160308]
    • Organism: Danio rerio
    Length: 2576 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: protein modification process [IEA]
    protein ubiquitination [IEA]
    Molecular Function: ubiquitin-protein ligase activity [IEA]
    metal ion binding [IEA]
    acid-amino acid ligase activity [IEA]
    binding [IEA]
    transferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVDPDTLL EWLQMGQGDE RDMQLIALEQ LCMLLLMSDN VDRCFETCPP RTFLPALCKI  60
   61 FLDESAPDNV LEVTARAITY YLDVSAECTR RIVGVDGAIK ALCNRLVVVE LNNRTSRDLA 120
  121 EQCVKVLELI CTRESGAVFE AGGLNCVLSF IRDSGHLVHK DTLHSAMAVV SRLCSKMEPQ 180
  181 DSSLETCVES LSSLLKHEDH QVSDGALRCF ASLADRFTRR GVDPAPLAKH GLTEELLSRM 240
  241 AAAGGTASGP SSTCKPGRTS SGAAPSAADS KLSNQVSTIV SLLSTLCRGS PLVTHDLLRS 300
  301 ELPDSMESAL QGDERCVLDT MRLVDLLLVL LFEGRKALPK STAGSTGRIP GLRRLDSSGE 360
  361 RSHRQLIDCI RSKDTDALID AIDTGAFEVN FMDDVGQTLL NWASAFGTQE MVEFLCERGA 420
  421 DVNRGQRSSS LHYAACFGRP QVAKTLLRHG ANPDLRDEDG KTPLDKARER GHSEVVAILQ 480
  481 SPGDWMCPVN KGDDKKKKDV NKEEEEGSEP KGDPEMAPIY LKRLLPVFAQ TFQQTMLPSI 540
  541 RKASLALIRK MVHYSSEVLL KEVCDSDAGH NLPTVLVEIT ATVLDQEDDD DGHLLALQII 600
  601 RDLVDKGGDV FLDQLARLGV INKVSTLAGP TSDDENEEEA KPEKDDEPQE DAKEIQQGKP 660
  661 YHWRDWSIIR GRDCLYIWSD AAALELSNGS NGWFRFILDG KLATMYSSGS PEGGSDSSES 720
  721 RSEFLEKLQR ARSQVKPVTA SQPILSTQGP TKLTVGNWSL TCLKEGEIAI HNSDGQQATI 780
  781 LKEDLPGFVF ESNRGTKHSF TAETSLGSEF VTGWTGKRGR KLKSKLEKTK QKVKTMARDL 840
  841 YDDHFKAVES MPRGVVVTLR NIATQLESAW ELHTNRQCIE GENTWRDLMK TALENLIVVL 900
  901 KDENTISPYE MCSSGLVQAL FTVLSNSVEL DIKHDCKPLM ERINVFKTAF TENEDDESRP 960
  961 AVALIRKLIA VLESIERLPL HLYDTPGSTY NLQILTRRLR FRLERAPGET ALIDRTGRML1020
 1021 KMEPLATVES LEQYLLKMVA KQWYDFDRSS FIFVRKLREG QNFTFRHQHD FDENGIVYWI1080
 1081 GTNAKTAYEW VNPAAYGLVV VTSSEGRNLP YGRLEDILSR DSSALNCHTN DDKNAWFAID1140
 1141 LGLWFVPSAY TLRHARGYGR SALRNWVFQV SKDGQNWMTL YTHVDDSSLN EPGSTATWPL1200
 1201 DPSKDEKQGW RHIRIKQMGK NASGQTHYLS LSGLEIYGTV TGVCEDQLGK AVKEAEANLR1260
 1261 RQRRLFRSQV MKYIVPGARV VRGIDWKWRD QDGNPAGEGT VTGEAHNGWI DVTWDAGGSN1320
 1321 SYRMGAEGKF DLKLAPGYDP ESAPSPKPVS STVAGTPQSW SSLVKNNCPD KGGSSSTAGA1380
 1381 SSSSRKGSSS SVCSVASSSD ISLSSTRVER RVESLFEQGV GVIGGPPGAE GQEPIVVLSS1440
 1441 AEAGSASSTS TLTADTGSES ERKTPGPDGT RQSAESTAIS MGIVSVSSPD VSSVSESSSK1500
 1501 DAASQRPLCS ATSARLSVSS LLAAGAPMSS SASVPNLSSR EASLMESFVR RAPNMSRTNA1560
 1561 TNNMNLSRSS SDNNTNTLGR NVMSTATSPL MGAQSFPNLT TTGTTSTVTM STSIVTSSNN1620
 1621 VATATTGLSV GQLLSNTLTT SLTSTSSESD TDFLDSCRAN TLLAELDDEE DLPEPDDDDD1680
 1681 ENEDDNQEEQ EYEEVLVRSR VNLGYHVHIH REEEEYETKG GRRRTWDDDF VLKRQFSALV1740
 1741 PAFDPRPGRT NVQQTTDLEI PPPGTPRSEV QEEVECAPSP RLALILKVAG LGTTREVELP1800
 1801 LTNYKSTIFY YVQKLLQLSC NGAIKPDKLR RIWEPTYTIM YRELKDSDKE RESGKMGCWS1860
 1861 VEHVEQYLGT DELPKNDLIT YMQKNADSTF LRHWKLTGSN KSIRKNRNCS QLIAAYKDFC1920
 1921 ERGCRSSGLS SGTLSTTQSC DILSAAREQA QAKAGSGQSA CSVEDVLQLL RILFTIGGEP1980
 1981 TSGRTLQEDV EELQFNASPE EFTSKKITTK ILQQIEEPLA LASGALPDWC EQLTSKCPFL2040
 2041 IPFETRQLYF TCTAFGASRA IVWLQNRREA TMERSRPSTT VRRDDPGEFR VGRLKHERVK2100
 2101 VPRGESMMEW AESVMQIHAD RKSVLEVEFQ GEEGTGLGPT LEFYALVAAE FQRTSLGIWL2160
 2161 CDDDFPDDES RQVDLGGGLK PPGYYVQRSC GLFPAPFPQD SDELERITKL FLFLGIFLAK2220
 2221 CIQDNRLVDL PISQPFFKLL CMGDIKSNMS KLLYQTRGES DCHFSEIQSE ASTEEGQDTY2280
 2281 SVGSFDEDSK SEFILDPPKP KPPAWYHGIL TWEDFELVNP HRALFLKELK ALSVKRRQIL2340
 2341 GNKSLSEDEK NTRLQDLMLK NPMGSGPPLC VEDLGLNFQF CPSSKVHGFS SVDLKPNGED2400
 2401 EMVTMDNAEE YVELMFDFCM HTGIQKQMEA FREGFNKVFP MEKLSSFSHK EVQMILCGNQ2460
 2461 SPSWTAEDIV NYTEPKLGYT RDSPGFLRFV RVLCGMSSDE RKAFLQFTTG CSTLPPGGLA2520
 2521 NLHPRLTIVR KVDATDASYP SVNTCVHYLK LPEYSSEEIM RERLLAATME KGFHLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle