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Protein Overview: gi|51971413, gi|...

General Information:
Name(s) found: gi|51971413 [NCBI NR]
gi|30677893 [NCBI NR]
gi|21539507 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|51971413|dbj|BAD44371.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30677893|ref|NP_849920.1| nucleotidyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|21539507|gb|AAM53306.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biosynthetic process [IEA]
    Molecular Function: nucleotidyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDAAIRTVV EAIHSSPTQA VVYLCGGASL ALGWLMSVPG ASNTLLESVV PYSRVSMVQL  60
   61 LGRVPSQHCS QALAKEMALL AYNRALKLSK PGYPVLGVGF TGSLVTSRPK RGDHRFFLSM 120
  121 RASDRILESS VTLTKNLRSR EEEDKVSSCA LIQAMAKACQ VSGTLDSGLT ESEVPYESET 180
  181 HFTEEQELEQ LINGHLCCKI YPFSGEAHGS DEDRKIILPG SFNPLHEGHL KLLEVAMSVC 240
  241 GGGYPCFEIS AINADKPPLT IAQIKDRVKQ FEVVGKTIIV SNQPYFYKKA ELFPGSSFVI 300
  301 GADTAARLVN PKYYEGSIKR MLEILGDCKR TGCTFLVGGR NVDGVFKVLE DVDIPEEIID 360
  361 MFISIPADIF RMDISSTEIR KKQGGGTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 37.0 The crystal structure of competence/damage inducible protein CihA from Agrobacterium tumefaciens
    2 View Details [170..388] PSI-BLAST 32.0 Nicotinamide mononucleotide (NMN) adenylyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.84668360172717 bayes_pls_golite062009
  • ligase activity
    		•  0.41353894226697 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.1911539125531 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.1911539125531 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.178548924377401 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle