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Protein Overview: gi|20856761, gi|...

General Information:
Name(s) found: gi|29028738 [NCBI NR]
gi|22326569 [NCBI NR]
gi|20856761 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|29028738|gb|AAO64748.1| At5g02170/T7H20_220 [Arabidopsis thaliana] [NCBI NR]
  • gi|22326569|ref|NP_195837.2| amino acid transporter family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20856761|gb|AAM26683.1| AT5g02170/T7H20_220 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    Biological Process: amino acid transport [ISS]
    Molecular Function: amino acid transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQNETFDQE REDLYHTFDE EDEESQTESS VPSTPLSRNR SEDVPVPWPR SYRQSMDLLT  60
   61 GVTPPTSTSF VSSFRQRRQS SVFGSFTSSP SKQQLLIDKD EIQSSVVSSI KSFLASHLQL 120
  121 SVPGDLLTPQ ENRSCTFSQS VLNGINVLCG VALLTMPYAV KEGGWLGLFI LFSFGIITFY 180
  181 TGILLKRCLE NSPGIHTYPD IGQAAFGTTG RILVSILLYV ELYASCVEYI IMMSDNLSRM 240
  241 FPNTSLYING FSLDSTQVFA ITTTLIVLPT VWLKDLSLLS YLSAGGVISS ILLALCLFWA 300
  301 GSVDGVGFHI SGQALDITNI PVAIGIYGFG FGSHSVFPNI YSSMKEPSKF PTVLLISFAF 360
  361 CTLFYIAVAV CGFTMFGDAI QSQFTLNMPP HFTSSKIAVW TAVVTPMTKY ALTITPVMLS 420
  421 LEELIPSSSR KMRSKGVSML FRTILVLSTL VVALTVPFFA TVAALIGSFI AMLIALIFPC 480
  481 LCYISIMKGR LTNFQIGICI LIVIIGIVSG CCGTYSAIAR LIGEMT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] FFAS03 1.22 TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX
    2 View Details [128..526] FFAS03 1.87 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.80712668888483 bayes_pls_golite062009
  • protein binding
    		•  0.25520383752473 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle