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Protein Overview: gi|18398728, gi|...

General Information:
Name(s) found: gi|21464551 [NCBI NR]
gi|18398728 [NCBI NR]
gi|14030681 [NCBI NR]
Description(s) found:
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  • gi|21464551|gb|AAM52230.1| AT3g10030/T22K18_15 [Arabidopsis thaliana] [NCBI NR]
  • gi|18398728|ref|NP_566366.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14030681|gb|AAK53015.1|AF375431_1 AT3g10030/T22K18_15 [Arabidopsis thaliana] [NCBI NR]
  • AT3g10030/T22K18_15 [Arabidopsis thaliana]gi|14030681|gb|AAK53015.1| AT3g10030/T22K18_15 [Arabidopsis thaliana]gi|18398728|ref|NP_566366.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aspartate/glutamate/uridylate kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aspartate/glutamate/uridylate kinase family protein | chr3:3092282-3094836 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g10030/T22K18_15 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | aspartate/glutamate/uridylate kinase family protein | chr3:3092277-3094831 REVERSE LENGTH=542 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3g10030/T22K18_15 OS=Arabidopsis thaliana GN=At3g10030 PE=2 SV=1 [ARATH-contam.fasta]
  • AT3g10030/T22K18_15 OS=Arabidopsis thaliana GN=At3g10030 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 542 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: cellular amino acid biosynthetic process [IEA][ISS]
    Molecular Function: DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCDDDFSL LGDDQSNPNQ HHHHHQVLHH TPYAPRRFNP KPSNQILLPH HQRNGDEDDE  60
   61 NDVVVEASSA FHGHGVNPFT ADENSNPYDD NNAAVDEDED EDLGANRSRI GGVRVEKRQS 120
  121 QEELSDGGTT NGGEITPYGS FKRPRTSSSS AGEYRKDREE WSDAAIACLL DAYSDKFTQL 180
  181 NRGNLRGRDW EEVASSVSER CEKLSKSVEQ CKNKIDNLKK RYKLERHRMS SGGTAASHWP 240
  241 WFKKMEDIVG NSLALKGASD EDRSGSSMGN TVKPARRYPL VTYNPGVQIN NVKSKATSNP 300
  301 RWRRVVLKIS GAALACTGPN NIDPKVINLI AREVAMACRL GVEVAIVVGS RNFFCGSTWV 360
  361 TATGLDRTTA YHISMMASVM NSALLQSSLE KIGVQARLQT AISVQGVGEP YNRQRATRHL 420
  421 DKGRVVIFGG IGATLGNPLL SSDASAALRA IDINAEAVVK GTNVDGVYDC HSQDSNVTFE 480
  481 HISFQDLASR GLTSMDTMAL NFCEENSIPV VVFNFLEAGN ITKALCGEQV GTLIDRSGRG 540
  541 VS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] FFAS03 1.86 No description for 2iw5B was found.
    2 View Details [285..542] PSI-BLAST 58.221849 The structure of E. coli UMP kinase in complex with UMP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • kinase activity
    		•  5.43826659128409 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  4.76215533422168 bayes_pls_golite062009
  • nucleotide kinase activity
    		•  4.36245911991838 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  4.17538459617947 bayes_pls_golite062009
  • uridylate kinase activity
    		•  3.54453921304057 bayes_pls_golite062009
  • catalytic activity
    		•  3.20382750184555 bayes_pls_golite062009
  • transferase activity
    		•  2.54481238004476 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.89315414622708 bayes_pls_golite062009
  • phosphotransferase activity, carboxyl group as acceptor
    		•  1.02979719559565 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle