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Protein Overview: gi|28973777, gi|...

General Information:
Name(s) found: gi|42566961 [NCBI NR]
gi|28973777 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|42566961|ref|NP_193692.2| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28973777|gb|AAO64204.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 558 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNKEEAKR ALDIAEKKLS KNDYNRAKRY AKKAHRMYPN LVGLEQVLIM IDVYISATNK  60
   61 INGEADWYRV LGVDPLADDE AVKKRYRKLA LLLHPDKNRF TGAEGAFKLI LEAWDLLSDK 120
  121 SQRSSYDQKR KSNQVKQRTS GMQKPKRSST PKPTESDKPA SSYGPTPPPE PRPKRRPRPN 180
  181 IPEPDIPMPM PTRHKPKSKP DISLTTVKVG TFWTVCNRCK TYCEFMRASC LNKTVPCPNC 240
  241 GKYFIATVIP SELVNGRLVI RLSPCNQSTW KKASDDTSST SAMAKTVPER VKRWFDPMPE 300
  301 MDSSTQKIGT FWTVCSRCKT HCKLVRANHL NKTFPCPNCS QEFVAAEMII EVINGGPVIK 360
  361 LSPSVQSNSK RTRDASSTTS ASDKAQRTAY QKEEVLKREK IDPDVASAAT GENVKVAETL 420
  421 FKEPMTTGNE NSTTEEGIVK ESETLCKEPM TTGNENSTTE EGNVKEAETF FEEPMTTGNV 480
  481 KEVETLFEEP MTTDNENSTP EAERLFKKPM STGDENSTHE AQRLFKKPMT TGNANSNLEA 540
  541 QRCFLRIWQR EMQSLLLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] PSI-BLAST 4.09691 Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)
    2 View Details [62..154] PSI-BLAST 22.522879 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [155..415] PSI-BLAST 35.0 The crystal structure of Hsp40 Ydj1
    4 View Details [416..558] FFAS03 1.17 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.036672061154828 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle