| Protein: | gi|28973777, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28973777, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..62] | [430..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MESNKEEAKR ALDIAEKKLS KNDYNRAKRY AKKAHRMYPN LVGLEQVLIM IDVYISATNK 60
61 I
|
| Detection Method: |  |
| Confidence: | 4.09691 |
| Match: | 2fo7A |
| Description: | Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [62-154] |
1 11 21 31 41 51
| | | | | |
1 NGEADWYRVL GVDPLADDEA VKKRYRKLAL LLHPDKNRFT GAEGAFKLIL EAWDLLSDKS 60
61 QRSSYDQKRK SNQVKQRTSG MQKPKRSSTP KPT
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-415] |
1 11 21 31 41 51
| | | | | |
1 ESDKPASSYG PTPPPEPRPK RRPRPNIPEP DIPMPMPTRH KPKSKPDISL TTVKVGTFWT 60
61 VCNRCKTYCE FMRASCLNKT VPCPNCGKYF IATVIPSELV NGRLVIRLSP CNQSTWKKAS 120
121 DDTSSTSAMA KTVPERVKRW FDPMPEMDSS TQKIGTFWTV CSRCKTHCKL VRANHLNKTF 180
181 PCPNCSQEFV AAEMIIEVIN GGPVIKLSPS VQSNSKRTRD ASSTTSASDK AQRTAYQKEE 240
241 VLKREKIDPD VASAATGENV K
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
|
Region A: Residues: [416-558] |
1 11 21 31 41 51
| | | | | |
1 VAETLFKEPM TTGNENSTTE EGIVKESETL CKEPMTTGNE NSTTEEGNVK EAETFFEEPM 60
61 TTGNVKEVET LFEEPMTTDN ENSTPEAERL FKKPMSTGDE NSTHEAQRLF KKPMTTGNAN 120
121 SNLEAQRCFL RIWQREMQSL LLK
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
