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Protein Overview: gi|28973191, gi|...

General Information:
Name(s) found: gi|28973191 [NCBI NR]
gi|28392974 [NCBI NR]
gi|15241025 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|28973191|gb|AAO63920.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28392974|gb|AAO41922.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241025|ref|NP_198121.1| heavy-metal-associated domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metal ion transport [IEA][ISS]
    Molecular Function: metal ion binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT  60
   61 NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN NINNDCNYQK KPKKDNEETS 120
  121 GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK 180
  181 KKSLGNTTVV MEGGGGGGGG GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP 240
  241 YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY 300
  301 TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] PSI-BLAST 12.221849 Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis
    2 View Details [101..179] deduced N/A No confident structure predictions are available.
    3 View Details [180..352] PSI-BLAST 3.39794 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle