| Protein: | gi|28973191, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 352 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28973191, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
154.0 | [0..94] | [346..1433] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT 60
61 NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
|
| Detection Method: |  |
| Confidence: | 12.221849 |
| Match: | 1p6tA |
| Description: | Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.246147507070597 | bayes_pls_golite062009 |
|
Region A: Residues: [101-179] |
1 11 21 31 41 51
| | | | | |
1 NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN 60
61 GQLQPQGDGA PKKKKKKKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-352] |
1 11 21 31 41 51
| | | | | |
1 KKKSLGNTTV VMEGGGGGGG GGGPPQNDGP PETVIYSAPQ DHHIIHGPPP HLHHHQQQNH 60
61 PYPTVHSPPR HHPQQMYGPG PGLPPPSFYH TQPQTAPSYT VSYNTVHGPI NNGGNETASY 120
121 YTAPPSHPTS YYSYEYVDTG YESPPPEFYS YRSQPSESFE SLSEGNPNSC CVM
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
