YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|28393508, gi|...

General Information:
Name(s) found: gi|42561701 [NCBI NR]
gi|28973127 [NCBI NR]
gi|28393508 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|42561701|ref|NP_171975.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28973127|gb|AAO63888.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28393508|gb|AAO42175.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|28393508|gb|AAO42175.1| unknown protein [Arabidopsis thaliana]gi|42561701|ref|NP_171975.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 RabGAP/TBC domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | RabGAP/TBC domain-containing protein | chr1:1359086-1361843 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr1:1359087-1361844 REVERSE LENGTH=448 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g04830 OS=Arabidopsis thaliana GN=At1g04830 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4I5T4, Putative uncharacterized protein At1g04830 OS=Arabidopsis thaliana GN=At1g04830 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKKVPEWL NSTMWSTPPP PSSYDDGLLR HSPVTKMKEE AESISVAPRL NSAPPPSSNT  60
   61 SVPSPSHRPR NGNSISGGSG EYGHSVGPSA EDFSRQAHVS AELSKKVINM KELRSLALQS 120
  121 LPDSPGIRST VWKLLLGYLP PERSLWSTEL KQKRSQYKHY KDELLTSPSE ITWKMVRSKG 180
  181 FDNYDLKSES RCMLARSRIT DEDHPLSLGK ASIWNTYFQD TETIEQIDRD VKRTHPDIPF 240
  241 FSGESSFARS NQESMKNILL VFAKLNQGIR YVQGMNEILA PIFYVFRNDP DEDSSSHAEA 300
  301 DAFFCFVELL SGFRDFYCQQ LDNSVVGIRS AITRLSQLVR KHDEELWRHL EITTKVNPQF 360
  361 YAFRWITLLL TQEFSFFDSL HIWDALLSDP EGPLESLLGI CCAMLVLVRR RLIAGDFTSN 420
  421 MKLLQHYPTT NISHLLYVAN KLRSKMLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..448] PSI-BLAST 46.69897 No description for 2qfzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle