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View Structure Prediction Details

Protein: gi|28393508, gi|...
Organism: Arabidopsis thaliana
Length: 448 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28393508, gi|....

Description E-value Query
Range
Subject
Range
gi|25354057, gi|... - gi|7211982|gb|AAF40453.1|AC004809_11 Similar to gi|3217452 F45E6.3 gene product from C. elegans cosm...
305.0 [0..1] [394..1]

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Predicted Domain #1
Region A:
Residues: [1-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKKVPEWL NSTMWSTPPP PSSYDDGLLR HSPVTKMKEE AESISVAPRL NSAPPPSSNT  60
   61 SVPSPSHRPR NGNSISGGSG EYGHSVGPSA EDFSRQAHVS AELSKKVINM KELRSLALQS 120
  121 LPDSPGIRST VWKLLLGYLP PERSLWSTEL KQKRSQYKHY KDELLTSPSE ITWKMVRSKG 180
  181 FDNYDLKSES RCMLARSRIT DEDHPLSLGK ASIWNTYFQD TETIEQIDRD VKRTHPDIPF 240
  241 FSGESSFARS NQESMKNILL VFAKLNQGIR YVQGMNEILA PIFYVFRNDP DEDSSSHAEA 300
  301 DAFFCFVELL SGFRDFYCQQ LDNSVVGIRS AITRLSQLVR KHDEELWRHL EITTKVNPQF 360
  361 YAFRWITLLL TQEFSFFDSL HIWDALLSDP EGPLESLLGI CCAMLVLVRR RLIAGDFTSN 420
  421 MKLLQHYPTT NISHLLYVAN KLRSKMLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle