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Protein Overview: EF105_ARATH

General Information:
Name(s) found: EF105_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75248477|sp|Q8VY90.1|EF105_ARATH RecName: Full=Ethylene-responsive transcription factor ERF105 [NCBI NR]
  • gi|21387011|gb|AAM47909.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18423250|ref|NP_568755.1| AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|18252239|gb|AAL61952.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1 [Swiss-Prot]
  • putative protein [Arabidopsis thaliana]gi|18252239|gb|AAL61952.1| putative protein [Arabidopsis thaliana]gi|18423250|ref|NP_568755.1| AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | AP2 domain-containing transcription factor, putative | chr5:20817934-20818599 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:20800708-20801373 REVERSE LENGTH=221 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 221 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to chitin [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSHQQQQE QDQSALDLIT QHLLTDFPSL DTFASTIHHC TTSTLSQRKP PLATIAVPTT  60
   61 APVVQENDQR HYRGVRRRPW GKYAAEIRDP NKKGVRVWLG TFDTAMEAAR GYDKAAFKLR 120
  121 GSKAILNFPL EAGKHEDLGD NKKTISLKAK RKRQVTEDES QLISRKAVKR EEAQVQADAC 180
  181 PLTPSSWKGF WDGADSKDMG IFSVPLLSPC PSLGHSQLVV T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 24.522879 GCC-box binding domain
    2 View Details [148..221] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle