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Protein Overview: CE37535

General Information:
Name(s) found: CE37535 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00010677 status:Confirmed UniProt:Q21351 protein_id:CAA93082.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: negative regulation of multicellular organism growth [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQITSALTQN KMDPINGNLT STAPVEPLSL TAAEQVGGAF CHQFYITVSE NRKAITKFYG  60
   61 HESKFYLDDQ VVTGSQEIVK LYNHLPETTH FKIQSIKGYP TPHKQGVIIN VIGTVNLRPF 120
  121 LQSFLLGQQG QKKYYVESDA FQYIDKFFVA NTEKEKTTSS TGHNGHASGA NGKDSKSSKT 180
  181 EQPKEQSKPA PPKQQTPKKA EDRIVKQDTP KSVEKEVAKT PQKPQLAQQP PQQRAPVPEP 240
  241 VQEQPKVQKT WANLVGGGGK SQPPQQQSYG QGQQIHQQTQ MHHMQPSMHQ QQQGSHAPLY 300
  301 QQQRQSHPAN ELRQAQESSD ANLNERKIYL GGITREIVPS NTAQAESEIK QVFYKYGEIE 360
  361 EVRMPRKVLD SPNDTSKHAF AFITMRNKAG VKAIFEAATK DEQGVWKLPL KLDAFGFDGH 420
  421 AQISEQRDQP QGGGFRGGRG GFQPRGGQFF RRGGSGGAPR GGMRSGFQNA GQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 32.30103 Structure of nuclear transport factor 2 (Ntf2) from Cryptosporidium parvum
    2 View Details [143..473] PSI-BLAST 35.0 Nuclear ribonucleoprotein A1 (RNP A1, UP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.986006126760401 bayes_pls_golite062009
  • protein binding
    		•  0.524130754919636 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  2.10590295737522 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.43479844212501 bayes_pls_golite062009
  • RNA binding
    		•  0.863532182990129 bayes_pls_golite062009
  • protein binding
    		•  0.303849616374798 bayes_pls_golite062009
  • mRNA binding
    		•  0.0677652340577004 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle