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Protein Overview: gi|14517422, gi|...

General Information:
Name(s) found: gi|20908080 [NCBI NR]
gi|15238777 [NCBI NR]
gi|14517422 [NCBI NR]
Description(s) found:
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  • gi|20908080|gb|AAM26723.1| AT5g53570/MNC6_11 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238777|ref|NP_200169.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14517422|gb|AAK62601.1| AT5g53570/MNC6_11 [Arabidopsis thaliana] [NCBI NR]
  • AT5g53570/MNC6_11 [Arabidopsis thaliana]gi|14517422|gb|AAK62601.1| AT5g53570/MNC6_11 [Arabidopsis thaliana]gi|15238777|ref|NP_200169.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 RabGAP/TBC domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | RabGAP/TBC domain-containing protein | chr5:21778150-21780308 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT5g53570/MNC6_11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:21760924-21763082 REVERSE LENGTH=550 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g53570/MNC6_11 OS=Arabidopsis thaliana GN=At5g53570 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4JX92, AT5g53570/MNC6_11 OS=Arabidopsis thaliana GN=At5g53570 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 550 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [IEA]
    Biological Process: regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALRRSYTS TSSGNSSSSS SLPSSSSSSL PSSSSSSPPS SNSNSYSNSN SSSSSSSWIH  60
   61 LRSVLFVANL SSPSSVTSSD RRRKSPWSRR KRKWALTPHQ WRSLFTPEGK LRDGGVGFLK 120
  121 KVRSRGVDPS IRAEVWLFLL GVYDLNSTSE EREAVKTQKR KEYEKLQRRC QMLLKCGNGS 180
  181 TDNLEELPSD EANSQCVRFV DDYKITGPMT SQDVVSALNT DSSDTDSCED NEDVLLLSSF 240
  241 AHSDEKKPEE DNSNNNSEEN SSLLVAAASE VQVEVAVHED FSTWQRIIRL DALRADSEWA 300
  301 NYSPYSTAIT ESKARRLAES VGLKDYDHLE SCRLYHAARL VAILEAYAMY DPEIGYCQGM 360
  361 SDLLSPILAV ISEDHEAFWC FVGFMKKARH NFRLDEAGIQ RQLSIVSKII KNKDSQLYKH 420
  421 LENLQAEDCS FVYRMVLVMF RRELSFEQTL CLWEVMWADQ AAIRAGVGKS PWSRIRQQAP 480
  481 PTDDLLLYAI AALVLRRKLI IQKYSSMDEI VEECNSMAGQ LNVWKLLDDA HHLVVTLHDK 540
  541 IETLSQSQSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] FFAS03 3.53 No description for 2qfzA was found.
    2 View Details [236..550] PSI-BLAST 43.045757 No description for 2qq8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle