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View Structure Prediction Details

Protein: gi|14517422, gi|...
Organism: Arabidopsis thaliana
Length: 550 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14517422, gi|....

Description E-value Query
Range
Subject
Range
gi|76631713 - gi|76631713|ref|XP_614486.2| PREDICTED: similar to TBC1 domain family, member 4 isoform 1 [Bos tauru...
303.0 [0..5] [543..596]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALRRSYTS TSSGNSSSSS SLPSSSSSSL PSSSSSSPPS SNSNSYSNSN SSSSSSSWIH  60
   61 LRSVLFVANL SSPSSVTSSD RRRKSPWSRR KRKWALTPHQ WRSLFTPEGK LRDGGVGFLK 120
  121 KVRSRGVDPS IRAEVWLFLL GVYDLNSTSE EREAVKTQKR KEYEKLQRRC QMLLKCGNGS 180
  181 TDNLEELPSD EANSQCVRFV DDYKITGPMT SQDVVSALNT DSSDTDSCED NEDVL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.53
Match: 2qfzA
Description: No description for 2qfzA was found.

Predicted Domain #2
Region A:
Residues: [236-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLSSFAHSDE KKPEEDNSNN NSEENSSLLV AAASEVQVEV AVHEDFSTWQ RIIRLDALRA  60
   61 DSEWANYSPY STAITESKAR RLAESVGLKD YDHLESCRLY HAARLVAILE AYAMYDPEIG 120
  121 YCQGMSDLLS PILAVISEDH EAFWCFVGFM KKARHNFRLD EAGIQRQLSI VSKIIKNKDS 180
  181 QLYKHLENLQ AEDCSFVYRM VLVMFRRELS FEQTLCLWEV MWADQAAIRA GVGKSPWSRI 240
  241 RQQAPPTDDL LLYAIAALVL RRKLIIQKYS SMDEIVEECN SMAGQLNVWK LLDDAHHLVV 300
  301 TLHDKIETLS QSQSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.045757
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle