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Protein Overview: gi|18424704, gi|...

General Information:
Name(s) found: gi|28827534 [NCBI NR]
gi|28392931 [NCBI NR]
gi|224589743 [NCBI NR]
gi|18424704 [NCBI NR]
Description(s) found:
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  • gi|28827534|gb|AAO50611.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|28392931|gb|AAO41901.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|224589743|gb|ACN59403.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|18424704|ref|NP_568971.1| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]gi|28392931|gb|AAO41901.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]gi|18424704|ref|NP_568971.1| leucine-rich repeat transmembrane pro [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Leucine-rich repeat transmembrane protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:25412399-25414994 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / protein kinase/ protein serine/threonine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Leucine-rich repeat protein kinase family protein | chr5:25395173-25397768 REVERSE LENGTH=680 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Leucine-rich repeat protein kinase family protein OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of C0LGN2, Leucine-rich repeat protein kinase family protein OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 680 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [ISS]
    protein kinase activity [ISS]
    protein serine/threonine kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLFKFIFLL SLLWSFYSLG SSQLQASQAQ VLLQLKKHLE YPQQLESWYD HRTNFCYLQA  60
   61 TPSMNITCFS NSVSELNIFG DKSSEKAKSF DGFAISNVTL SDGFSIESFV TTLSRLKSLR 120
  121 VLTLASLGIW GRLPEKLHRL SSLEYLDLSN NFLFGSVPPK LSTMVKLETF RFDHNFFNGT 180
  181 LPSWFDSYWY LKVLSFKSNK LSGELHSSLL SLSTIEYIDL RANSLSGSLP DDLKCGSKLW 240
  241 FIDISDNKLT GKLPRCLSSK QDIALRFNGN CLSLEKQQHP ESFCVKEVRA AAKAEAKAEA 300
  301 EAANESGKRK WKKGALIGLI VGISMSVLVL VCCVFILLRR KGVTKKHVHH NTVQDNHPTT 360
  361 GFSSEILSNA RYISETSKFG SEDLPVCRQF SLEEIVKATK NFDKTMILGE SSLYGTLYKG 420
  421 NLENGTKVAI RCLPSSKKYS IRNLKLRLDL LAKLRHPNLV CLLGHCIDCG GKDDYSVEKV 480
  481 FLIYEYIPNG NFQSCLSDNS SGKGMNWSER LNVLTGVAKA VHFLHTGVIP GFFSNRLKTN 540
  541 NVLLNQHRFA KLSDYGLSIV SEATRHNTEI AKSWQMSRLE DDVYSFGLIL LQSIVGPSVS 600
  601 AREEAFLRDE LASLESEEGR RRMVNPTVQA TCRNGSLIRV ITLMNKCVSP ESLSRPSFED 660
  661 ILWNLQYASQ LQAASDGDQC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 15.09691 Polygalacturonase inhibiting protein PGIP
    2 View Details [274..357] deduced N/A No confident structure predictions are available.
    3 View Details [358..576] FFAS03 7.19 No description for 2qkwB was found.
    4 View Details [577..680] PSI-BLAST 60.39794 No description for 2qkwB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle