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Protein Overview: TAF2_ARATH

General Information:
Name(s) found: TAF2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|22330618|ref|NP_177536.2| TAF2 (TBP-ASSOCIATED FACTOR 2); metallopeptidase/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|20856938|gb|AAM26691.1| At1g73960/F2P9_17 [Arabidopsis thaliana] [NCBI NR]
  • Transcription initiation factor TFIID subunit 2 OS=Arabidopsis thaliana GN=TAF2 PE=2 SV=1 [Swiss-Prot]
  • At1g73960/F2P9_17 [Arabidopsis thaliana]gi|22330618|ref|NP_177536.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: TAF2 | TAF2 (TBP-ASSOCIATED FACTOR 2); metallopeptidase/ zinc ion binding | chr1:27808834-27818094 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g73960/F2P9_17 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: TAF2 | TBP-associated factor 2 | chr1:27805173-27814433 REVERSE LENGTH=1390 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g73960/F2P9_17 OS=Arabidopsis thaliana GN=TAF2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1390 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    metallopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKARKPKNE EAPGAKTSEN TGAKVLHQKL FLSIDFKKRQ IYGYTELEVS VPDIGIVGLH  60
   61 AENLGIESVL VDGEPTVFEY YPHHQNSETE SNWNSVSDPA SAADAAAMEY VGVLKREDTA 120
  121 NLLINCCKPS KDLSEQLDSV TLENGSQSSG EAKQNVKLIR INYWVEKIES GIHFDGNIVH 180
  181 TDNQMRRARC WFPCIDDEYH RCSFDLEFTV PHNFVAVSVG KLLYQVMCKE DTTQKTYVYE 240
  241 LAIPIAPRWV SLVAGPLEIL PDQTNFLISN LCLPHDLSRL RNTMEFFHEA YSYYEDYLSA 300
  301 NFPFGFYKQV FLPPEMVVTS STSGASLSIF SSHILYDERV IDQTIDTRIK LASALAKQWF 360
  361 GVYITPESPN DDWLLDGLAG FLTDMFIKQF LGNNEARYRR YKANCAVCKA DDSGAMCLSS 420
  421 SPSCRDLFGT HSIGMHGKIR SWKSGAVLQM LEKQMGSDSF RKILQKIISR AKDPSNSIRS 480
  481 LSTKEFRQFA NKIGNLERPF LKEFFQRWVA SYGCPVLRIG LSYNKRKNNV EMAALRECTA 540
  541 ALDARLSVIG ATSDSESRDV DAGWPGIMSI RVYELDGMSD HPKLPMAGDR WQLLELPCHS 600
  601 KLAAKRYQKP KKGGKPDGAE DNVDAIAPLE NKTSIESPLA WIKADPEMEY IAEIHLHQPL 660
  661 QMWVNQLEKD GDVVAQAQAI ASLEALKQHS FSIVNALKNV LTDSKVFWRI RIAAAFALAK 720
  721 TASEESDWAG LQHLIKFYKS RRFDAEIGLP KPNDFRDFPE YFVLEAIPHA IAIVRGAEGK 780
  781 SPREAVEFIL QLLKYNDNSG NSYSDVFWLA VLVQSVGDLE FCQQSLTFLA PLLKRIDRLL 840
  841 QFDRLMPSYN GILTISCIRT LAQTALKLSD SISFDHICKL IEPFRNSDTI LQIRIEGSRA 900
  901 LLDIEYQSKG ISSALLLFMK YLVEESSLRG QVKLCVHTMR LCQIAVGCDS DDCVDTVTLL 960
  961 DLLHLFKSHV VFNNELLRYY LFCIFQILAG RPPTLFGVPK EKPLQLVDVE ACIEPKNVFL1020
 1021 VPGAEAGEPS LSALGDAKGQ SLDVAPYGVP IIPQEMFMPI VPELMLPEPV AAYDETQHLE1080
 1081 PRMESQNQPS HENPIVHEIP SDVEGPTEEL AHREANPPTK EPQKEPDVVS VSVSHEVKKS1140
 1141 VIRIKVRPSG ATSRAEGSAR TIERSQGIVV RHDIDRGQTS SASVDAPQRI STDAVSISNQ1200
 1201 NHVEEVNSCH DVGSRMTASI GSVKFASEGD IFGKELQCTA ESGKPSTSQK ADNNNRTVPP1260
 1261 SFLPLDHSME NEAQQKYASL QTLSIGKEKE KKKDKEKKEK KRKREDPVYL EKKRLKKEKK1320
 1321 RKEKEMAKLV SSTTDPAKKK IESVAEVKEE EPSDGAMLIK VEPKTEPSTA EARPLPKFRI1380
 1381 KLKSKAFNNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] MSA 2.606995 View MSA. No confident structure predictions are available.
    2 View Details [72..948] PSI-BLAST 139.0 No description for 2hpoA was found.
    3 View Details [949..1186] deduced N/A No confident structure predictions are available.
    4 View Details [1187..1243] MSA 2.004989 View MSA. Confident ab initio structure predictions are available.
    5 View Details [1244..1390] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle